Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 EZH2P1-201ENST00000431167 291 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 CKS1BP5-201ENST00000434172 273 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC092902.1-201ENST00000486999 259 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC008885.2-201ENST00000509506 930 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC012493.3-201ENST00000604494 112 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 RNU6-461P-201ENST00000364195 107 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 RNU4-41P-201ENST00000364426 143 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
VPS13CQ709C8 AC092638.1-201ENST00000411966 1275 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 SNORD121B-201ENST00000458838 81 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 AC021146.7-201ENST00000509604 775 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.17□□□□□ -2.22
VPS13CQ709C8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS13CQ709C8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
VPS13CQ709C8 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS13CQ709C8 AC009961.3-201ENST00000449832 765 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS13CQ709C8 SETP7-201ENST00000552169 453 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VPS13CQ709C8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
VPS13CQ709C8 COX6CP14-201ENST00000469580 174 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS13CQ709C8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS13CQ709C8 STMN1P1-201ENST00000617809 440 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 AL449363.1-201ENST00000617815 186 ntBASIC1.17□□□□□ -2.22
VPS13CQ709C8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VPS13CQ709C8 OR10R1P-201ENST00000441524 1141 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.16□□□□□ -2.22
VPS13CQ709C8 RNA5SP121-201ENST00000516537 101 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 SUB1P4-201ENST00000566062 339 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
VPS13CQ709C8 AL596028.1-201ENST00000326971 197 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 AL033519.2-201ENST00000403958 392 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS13CQ709C8 DUXAP8-207ENST00000456786 622 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS13CQ709C8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
VPS13CQ709C8 AC004223.1-201ENST00000479840 271 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 RNU1-40P-201ENST00000516816 164 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 RNU1-97P-201ENST00000516872 164 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 AC104986.1-201ENST00000517978 436 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.16□□□□□ -2.22
VPS13CQ709C8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS13CQ709C8 SETP10-201ENST00000424368 814 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 MTCO1P48-201ENST00000448024 1096 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.16□□□□□ -2.22
VPS13CQ709C8 SNORA31.15-201ENST00000516771 132 ntBASIC1.16□□□□□ -2.22
VPS13CQ709C8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
VPS13CQ709C8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.15□□□□□ -2.22
VPS13CQ709C8 AC000367.1-201ENST00000452711 1766 ntBASIC1.15□□□□□ -2.22
VPS13CQ709C8 RPL19P1-201ENST00000411635 428 ntBASIC1.15□□□□□ -2.23
VPS13CQ709C8 AL031659.1-201ENST00000447075 539 ntBASIC1.15□□□□□ -2.23
VPS13CQ709C8 AC099778.2-201ENST00000610904 211 ntBASIC1.15□□□□□ -2.23
VPS13CQ709C8 AC104307.1-201ENST00000616142 196 ntBASIC1.15□□□□□ -2.23
VPS13CQ709C8 AC022513.1-201ENST00000624512 117 ntBASIC1.15□□□□□ -2.23
VPS13CQ709C8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS13CQ709C8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS13CQ709C8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
VPS13CQ709C8 CBX3P8-201ENST00000532412 525 ntBASIC1.15□□□□□ -2.23
VPS13CQ709C8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.15□□□□□ -2.23
VPS13CQ709C8 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
VPS13CQ709C8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.15□□□□□ -2.23
VPS13CQ709C8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VPS13CQ709C8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 Y_RNA.115-201ENST00000363272 98 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 AC114973.1-201ENST00000429057 632 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 RPL7P5-201ENST00000471472 736 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 AL583843.1-201ENST00000456070 346 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 RNA5SP395-201ENST00000516567 118 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 AC103810.8-201ENST00000607347 118 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 TEX21P-201ENST00000447107 1476 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VPS13CQ709C8 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.14□□□□□ -2.23
VPS13CQ709C8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VPS13CQ709C8 AC079776.3-201ENST00000450665 370 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 AC009474.2-201ENST00000451383 136 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.14□□□□□ -2.23
VPS13CQ709C8 RNU6-492P-201ENST00000363035 104 ntBASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC005297.2-201ENST00000450430 606 ntBASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS13CQ709C8 RPPH1-2P-201ENST00000516688 293 ntBASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS13CQ709C8 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
VPS13CQ709C8 OR4K8P-201ENST00000578842 1048 ntBASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS13CQ709C8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms