Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 LINC02211-204ENST00000642024 1070 ntBASIC2.98□□□□□ -1.93
ATL3Q6DD88 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
ATL3Q6DD88 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.98□□□□□ -1.93
ATL3Q6DD88 AC107982.1-201ENST00000507171 1300 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 SNORD56.5-201ENST00000364281 72 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 RPS4XP3-201ENST00000398541 413 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC079780.1-201ENST00000428259 207 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 HSFY7P-201ENST00000432672 318 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 HSFY8P-201ENST00000437934 318 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 RPS24P13-201ENST00000442520 397 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 Z96811.1-201ENST00000445880 108 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 RPL39P6-201ENST00000448289 150 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 NANOGNBP1-201ENST00000448444 480 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 TRGVB-201ENST00000453257 471 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 HSFY5P-201ENST00000453726 309 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 Z82190.1-201ENST00000454534 490 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 SUMO2P2-201ENST00000456482 255 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 snoU13.22-201ENST00000459428 104 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC079600.2-201ENST00000550076 130 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 HIGD1AP17-201ENST00000554576 276 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC007179.3-201ENST00000604976 235 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 AP002826.1-201ENST00000608835 315 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC096577.2-201ENST00000611455 153 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 AL445984.1-201ENST00000637834 659 ntBASIC2.97□□□□□ -1.93
ATL3Q6DD88 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.97□□□□□ -1.93
ATL3Q6DD88 AC073346.2-201ENST00000624724 2058 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ATL3Q6DD88 MIR620-201ENST00000385232 95 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 AL360182.1-201ENST00000397433 468 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 RNA5SP492-201ENST00000411330 114 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 MRPS36P1-201ENST00000421291 307 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 TMEM167AP1-201ENST00000423409 219 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 MTND2P20-201ENST00000440805 661 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 snoU109.3-201ENST00000459477 145 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 RPL30P14-201ENST00000482744 348 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC011825.1-201ENST00000484967 388 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 OR4G11P-201ENST00000492842 939 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 RNA5SP367-201ENST00000516557 118 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 SNORA31.21-201ENST00000517180 77 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 MIR4637-201ENST00000582405 84 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC106791.2-201ENST00000604680 391 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC097504.2-201ENST00000608088 454 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 AL121652.1-201ENST00000608851 448 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 AL391834.2-201ENST00000609982 546 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 PART1_2.1-201ENST00000612397 250 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
ATL3Q6DD88 OR4G11P-202ENST00000642116 1414 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ATL3Q6DD88 RNA5SP38-201ENST00000410750 119 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 RPL19P1-201ENST00000411635 428 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 RAP1BP1-201ENST00000412709 553 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 AL592310.1-201ENST00000414330 671 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.95□□□□□ -1.94
ATL3Q6DD88 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 RPL23AP83-201ENST00000434984 473 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 SDR42E1P3-201ENST00000438345 502 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 RPL23AP20-201ENST00000447965 421 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 AC108734.3-201ENST00000481241 1165 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 RPS27P27-201ENST00000498779 255 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.95□□□□□ -1.94
ATL3Q6DD88 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.95□□□□□ -1.94
ATL3Q6DD88 AC114322.1-201ENST00000506771 926 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 HMGB1P28-201ENST00000507778 552 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 AC008837.2-201ENST00000513076 418 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 MTATP6P9-201ENST00000515039 680 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 HSPA8P13-201ENST00000523715 472 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ATL3Q6DD88 HSPE1P20-201ENST00000538133 289 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 AC243972.3-201ENST00000539655 198 ntBASIC2.95□□□□□ -1.94
ATL3Q6DD88 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.95□□□□□ -1.94
ATL3Q6DD88 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms