Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AL606490.9-201ENST00000603331 271 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 RPL23AP92-201ENST00000603609 255 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AL160281.1-201ENST00000605307 311 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC121334.2-201ENST00000605387 271 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC009233.1-201ENST00000616477 371 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC015908.5-201ENST00000623289 343 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC093648.1-201ENST00000623546 606 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AC009161.2-201ENST00000624626 138 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 BMS1P21-201ENST00000634565 365 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KRT40Q6A162 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KRT40Q6A162 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
KRT40Q6A162 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KRT40Q6A162 AC093535.2-201ENST00000624769 2326 ntBASIC4.62□□□□□ -1.67
KRT40Q6A162 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KRT40Q6A162 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.62□□□□□ -1.67
KRT40Q6A162 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
KRT40Q6A162 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
KRT40Q6A162 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRT40Q6A162 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRT40Q6A162 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KRT40Q6A162 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
KRT40Q6A162 RNA5SP119-201ENST00000362715 117 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 RNA5SP399-201ENST00000364003 117 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 XGY1-201ENST00000381172 446 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 MIR491-201ENST00000384877 84 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 MIR7-3-201ENST00000384898 110 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 snosnR66.1-201ENST00000391095 99 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.61□□□□□ -1.67
KRT40Q6A162 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.61□□□□□ -1.67
KRT40Q6A162 AL513185.2-201ENST00000425543 193 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.61□□□□□ -1.67
KRT40Q6A162 RPL23AP30-201ENST00000432419 501 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.61□□□□□ -1.67
KRT40Q6A162 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.61□□□□□ -1.67
KRT40Q6A162 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.61□□□□□ -1.67
KRT40Q6A162 USP9YP15-201ENST00000442391 422 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 RPS3AP12-201ENST00000443616 753 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.61□□□□□ -1.67
KRT40Q6A162 HMGB3P22-202ENST00000451823 572 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AC093767.1-201ENST00000504523 156 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AC110768.1-201ENST00000509222 400 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.61□□□□□ -1.67
KRT40Q6A162 AC016065.2-201ENST00000514530 444 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 SNORA40.12-201ENST00000516329 111 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 RNU6-1153P-201ENST00000516760 105 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.61□□□□□ -1.67
KRT40Q6A162 AC055876.1-202ENST00000567053 138 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 RPS3AP23-202ENST00000574601 686 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.61□□□□□ -1.67
KRT40Q6A162 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.61□□□□□ -1.67
KRT40Q6A162 AC135507.2-201ENST00000612443 309 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AL136221.1-201ENST00000621449 509 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AC024940.5-201ENST00000622889 474 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.61□□□□□ -1.67
KRT40Q6A162 AC138649.5-201ENST00000637456 137 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 ELL2P4-201ENST00000446870 1376 ntBASIC4.61□□□□□ -1.67
KRT40Q6A162 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRT40Q6A162 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
KRT40Q6A162 CKAP2P1-201ENST00000555477 2049 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KRT40Q6A162 SNORA69-201ENST00000383895 132 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 RNU6-1207P-201ENST00000384343 107 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KRT40Q6A162 AL121834.1-202ENST00000404494 277 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 RPL31P52-201ENST00000407532 367 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 MIR1251-201ENST00000408552 70 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 MRPL50P2-201ENST00000416821 482 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 AC127526.1-201ENST00000417526 366 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 PDCL2P1-201ENST00000419302 352 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 AC006548.1-201ENST00000427470 102 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 AC008850.1-201ENST00000427546 362 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 PSMA6P3-201ENST00000428242 164 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AC016691.1-201ENST00000441321 413 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 AC093019.1-201ENST00000443135 252 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AP001992.1-205ENST00000462248 379 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 RPS3AP50-201ENST00000487064 803 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 AC055855.1-201ENST00000489563 579 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AC093853.1-201ENST00000515689 483 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KRT40Q6A162 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 ARL2BPP2-201ENST00000550907 489 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.6□□□□□ -1.67
KRT40Q6A162 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.6□□□□□ -1.67
KRT40Q6A162 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.6□□□□□ -1.67
KRT40Q6A162 SNORA51-201ENST00000606420 132 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 MIR6864-201ENST00000617935 70 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms