Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC007115.1-201ENST00000546853 234 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 OR10AB1P-201ENST00000609613 938 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AP001486.2-201ENST00000561652 5113 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 MIR517C-201ENST00000385103 95 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 RN7SKP101-201ENST00000411376 320 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 HMGB1P26-201ENST00000452520 628 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC013444.2-201ENST00000603317 787 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 APOOP1-201ENST00000604695 592 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC019159.1-201ENST00000605094 187 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AL157834.3-201ENST00000615543 103 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC000123.2-201ENST00000623124 461 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 RNU6-1-201ENST00000383898 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-42P-201ENST00000384165 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-36P-201ENST00000384172 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-4P-201ENST00000384205 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-5P-201ENST00000384238 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-3P-201ENST00000384314 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-2-201ENST00000384627 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-9-201ENST00000384776 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-33P-201ENST00000384793 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 AP001029.3-201ENST00000588063 596 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 RNU6-6P-201ENST00000606623 107 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 AC092954.1-201ENST00000609121 445 ntBASIC1.03□□□□□ -2.25
VPS13DQ5THJ4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 RNU6-146P-201ENST00000384602 108 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 SRIP3-201ENST00000413200 219 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 RPS15AP7-201ENST00000439294 405 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 SNORD53B-201ENST00000577887 78 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 OR4G1P-201ENST00000588632 938 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 VN1R74P-201ENST00000613259 503 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 RNU1-101P-201ENST00000391171 127 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 RNU1-139P-201ENST00000391307 165 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC079203.1-201ENST00000487972 404 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC010625.1-201ENST00000511296 403 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 MIR151B-201ENST00000584249 96 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 RPL19P1-201ENST00000411635 428 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC093084.1-201ENST00000424233 687 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC068338.1-201ENST00000565567 176 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AL354943.1-201ENST00000572103 781 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC010928.2-201ENST00000588017 287 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 MIR6515-201ENST00000619843 57 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 AC090740.1-201ENST00000623193 2262 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 MTND4P1-201ENST00000457501 1466 ntBASIC1.02□□□□□ -2.25
VPS13DQ5THJ4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 Y_RNA.178-201ENST00000363832 102 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 SNRPEP2-201ENST00000397592 279 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AC092473.1-201ENST00000441098 221 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AC004223.1-201ENST00000479840 271 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AL360085.1-201ENST00000604713 532 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 uc_338.20-201ENST00000621563 178 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AC016957.1-201ENST00000534895 309 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 SUMO2P6-201ENST00000505273 288 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 MTND5P10-201ENST00000603719 1809 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 PIGFP3-201ENST00000441918 722 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 MTND1P18-201ENST00000448191 573 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 HMGN2P18-201ENST00000450680 270 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AC092754.2-201ENST00000463506 460 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms