Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 RNU4-29P-201ENST00000515943 174 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 RNU6-27P-201ENST00000516146 107 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 SNORA31.26-201ENST00000517250 137 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC126177.3-201ENST00000551839 688 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AP001269.3-201ENST00000588718 329 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 RPP40P2-201ENST00000603596 712 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 DUXAP3-201ENST00000603616 594 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AP001330.4-201ENST00000604350 154 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC131235.4-201ENST00000609288 620 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 CYP3A51P-201ENST00000633513 256 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 NUP58P1-201ENST00000502546 1738 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AP002907.1-201ENST00000606361 1430 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 SSR1P2-201ENST00000415208 787 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AL513175.2-201ENST00000422071 443 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 PSMA6P3-201ENST00000428242 164 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 ATP5F1P1-201ENST00000433775 569 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC114967.1-201ENST00000504890 259 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC114322.1-201ENST00000506771 926 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 RNA5SP385-201ENST00000515947 110 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC005832.3-201ENST00000537929 631 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC107294.3-201ENST00000609211 526 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC107075.1-201ENST00000613695 314 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AL050303.3-201ENST00000613704 284 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AL355493.4-201ENST00000618530 292 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC006386.1-201ENST00000619436 415 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC013470.4-201ENST00000619978 986 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AP000676.4-201ENST00000624659 623 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC091925.2-201ENST00000625059 256 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC243829.7-201ENST00000633081 225 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 AC087359.1-201ENST00000508335 1740 ntBASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHROOM1Q2M3G4 CDR1-202ENST00000625883 1485 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC099786.3-201ENST00000565735 1410 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC138915.1-201ENST00000565427 1685 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 RNU6-216P-201ENST00000363282 104 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 Y_RNA.192-201ENST00000363977 102 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 RNU6-636P-201ENST00000384598 107 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 U3.29-201ENST00000391296 212 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 RNA5SP274-201ENST00000410484 108 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC245291.1-201ENST00000419501 328 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC063976.3-201ENST00000426849 329 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 SAR1AP4-201ENST00000429225 591 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 ARL5AP4-201ENST00000430731 512 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC004866.2-201ENST00000438285 481 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 TRIM60P18-201ENST00000441518 828 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC005297.2-201ENST00000450430 606 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 RPS29P12-201ENST00000460178 152 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC093278.1-201ENST00000494700 600 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC125611.1-201ENST00000549563 229 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 EEF1B2P4-201ENST00000551398 348 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC116618.1-201ENST00000634617 774 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 AC092593.1-201ENST00000515413 1815 ntBASIC3.28□□□□□ -1.88
SHROOM1Q2M3G4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.27□□□□□ -1.89
SHROOM1Q2M3G4 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.27□□□□□ -1.89
SHROOM1Q2M3G4 GDI2P1-201ENST00000429312 1336 ntBASIC3.27□□□□□ -1.89
SHROOM1Q2M3G4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SHROOM1Q2M3G4 CD24P4-201ENST00000382840 243 ntBASIC3.27□□□□□ -1.89
SHROOM1Q2M3G4 RNU2-15P-201ENST00000410692 191 ntBASIC3.27□□□□□ -1.89
SHROOM1Q2M3G4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms