Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AC091905.1-201ENST00000624400 311 ntBASIC4.56□□□□□ -1.68
ATP2B3Q16720 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATP2B3Q16720 MIR6715B-201ENST00000637172 77 ntBASIC4.56□□□□□ -1.68
ATP2B3Q16720 AC010149.2-201ENST00000637608 315 ntBASIC4.56□□□□□ -1.68
ATP2B3Q16720 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ATP2B3Q16720 AC009093.8-201ENST00000641769 292 ntBASIC4.56□□□□□ -1.68
ATP2B3Q16720 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
ATP2B3Q16720 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATP2B3Q16720 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATP2B3Q16720 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.56□□□□□ -1.68
ATP2B3Q16720 NCAPGP1-201ENST00000505112 1814 ntBASIC4.56□□□□□ -1.68
ATP2B3Q16720 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 MFSD8-236ENST00000641509 4050 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC097714.1-201ENST00000511272 1647 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2B3Q16720 RNU5E-1-201ENST00000362477 120 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 RNU6-730P-201ENST00000383954 104 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 Y_RNA.450-201ENST00000384198 113 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 SNORA70E-201ENST00000384492 135 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 ATP5A1P2-201ENST00000412323 255 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2B3Q16720 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 RPL30P16-201ENST00000419341 429 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 RPS6P12-201ENST00000432491 726 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 RPS3AP46-201ENST00000448352 682 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC006480.1-201ENST00000449887 378 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC019235.1-201ENST00000503847 207 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 ARL4AP2-201ENST00000507378 601 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 TXNP6-201ENST00000510190 310 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 RNU6-1178P-201ENST00000516674 107 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 RNU6-1220P-201ENST00000517126 108 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 RNU6-87P-201ENST00000607561 108 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 AC012150.2-201ENST00000621300 544 ntBASIC4.55□□□□□ -1.68
ATP2B3Q16720 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2B3Q16720 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.55□□□□□ -1.68
ATP2B3Q16720 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2B3Q16720 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2B3Q16720 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2B3Q16720 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2B3Q16720 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 RNU5E-4P-201ENST00000364931 120 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 RNU6-878P-201ENST00000384578 110 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATP2B3Q16720 RNU2-15P-201ENST00000410692 191 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC127391.1-201ENST00000411737 98 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 USP9YP6-201ENST00000413550 854 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 RWDD4P2-201ENST00000426392 563 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 OR51AB1P-201ENST00000429046 620 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 RPS4XP10-201ENST00000465034 731 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 KCTD9P5-201ENST00000504141 1170 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC105914.1-201ENST00000511798 226 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 HIGD1AP3-201ENST00000515857 278 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 RN7SKP18-201ENST00000516005 275 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 RNU6-201P-201ENST00000517100 61 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 SUMO2P20-201ENST00000520803 283 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC107934.1-201ENST00000522215 217 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC008011.1-201ENST00000545989 227 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 SNORA59B-202ENST00000578183 701 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 MIR3682-201ENST00000581338 84 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 MIR3118-1-201ENST00000581787 76 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC008739.3-201ENST00000603262 127 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC007566.2-201ENST00000603642 413 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AL391646.1-201ENST00000603860 190 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 MIR98-201ENST00000606724 119 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 OR6R2P-201ENST00000609216 300 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 BX664608.1-201ENST00000610519 487 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AL133173.2-201ENST00000614270 90 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC091953.2-201ENST00000623979 160 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATP2B3Q16720 NUP58P1-201ENST00000502546 1738 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 AC092447.10-201ENST00000620607 1652 ntBASIC4.54□□□□□ -1.68
ATP2B3Q16720 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.54□□□□□ -1.68
ATP2B3Q16720 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.53□□□□□ -1.68
ATP2B3Q16720 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATP2B3Q16720 AL359893.1-201ENST00000447628 1580 ntBASIC4.53□□□□□ -1.68
ATP2B3Q16720 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATP2B3Q16720 Y_RNA.88-201ENST00000363029 99 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms