Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SCN1BQ07699 U3.11-201ENST00000364476 212 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 RNU6-213P-201ENST00000384051 104 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
SCN1BQ07699 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.14□□□□□ -1.91
SCN1BQ07699 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCN1BQ07699 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCN1BQ07699 AC011233.1-201ENST00000422812 283 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 RPL7P2-201ENST00000427639 268 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN1BQ07699 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN1BQ07699 AC129850.1-201ENST00000436203 508 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 RPL21P89-201ENST00000444021 467 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 HSFY6P-201ENST00000445573 403 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 GAPDHP27-201ENST00000447427 1020 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
SCN1BQ07699 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN1BQ07699 MTND4LP3-201ENST00000468320 276 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AC010631.1-201ENST00000474150 156 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AC233702.1-201ENST00000482905 502 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN1BQ07699 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.14□□□□□ -1.91
SCN1BQ07699 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN1BQ07699 SNORA70.19-201ENST00000516717 90 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 RNU6-678P-201ENST00000516832 109 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 RNU6-352P-201ENST00000516908 107 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 SNORA31.21-201ENST00000517180 77 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.14□□□□□ -1.91
SCN1BQ07699 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.14□□□□□ -1.91
SCN1BQ07699 GTF2IP22-201ENST00000554443 182 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
SCN1BQ07699 AC090888.1-201ENST00000561335 1141 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AC009094.1-201ENST00000564443 426 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AC002400.1-201ENST00000569310 726 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN1BQ07699 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.14□□□□□ -1.91
SCN1BQ07699 AC112187.2-201ENST00000604345 283 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
SCN1BQ07699 AL357559.1-201ENST00000622228 274 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AP000676.4-201ENST00000624659 623 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.14□□□□□ -1.91
SCN1BQ07699 AC092192.1-201ENST00000633154 1018 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCN1BQ07699 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
SCN1BQ07699 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.14□□□□□ -1.91
SCN1BQ07699 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN1BQ07699 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SCN1BQ07699 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SCN1BQ07699 AL079305.1-201ENST00000623159 3008 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN1BQ07699 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SCN1BQ07699 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN1BQ07699 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN1BQ07699 RPL23AP39-201ENST00000415533 405 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN1BQ07699 USP12PX-201ENST00000432383 1057 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN1BQ07699 ARPC3P1-201ENST00000437218 533 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 ISCA1P2-201ENST00000438679 421 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AC005094.1-201ENST00000440420 368 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN1BQ07699 AL049734.2-201ENST00000441066 616 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 MTCO1P42-201ENST00000457379 726 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN1BQ07699 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN1BQ07699 RN7SL132P-201ENST00000478131 296 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AP000563.1-201ENST00000490865 758 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN1BQ07699 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN1BQ07699 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN1BQ07699 AC116347.2-201ENST00000514912 523 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 RNU6-579P-201ENST00000516879 102 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 MIR2276-201ENST00000516886 89 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.13□□□□□ -1.91
SCN1BQ07699 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AC026333.2-201ENST00000542164 106 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 CYCSP30-201ENST00000546447 172 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AC034105.3-201ENST00000565294 442 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 MTATP6P24-201ENST00000576835 677 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 MIR4286-201ENST00000580651 93 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 OR10AB1P-201ENST00000609613 938 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AL355472.4-201ENST00000610233 626 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SCN1BQ07699 AC005344.1-201ENST00000613391 459 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AL356863.1-201ENST00000623378 1080 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AL136313.1-201ENST00000624804 202 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AC017037.3-201ENST00000625016 472 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN1BQ07699 AC110079.1-202ENST00000635213 138 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 MTND1P37-201ENST00000636562 264 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN1BQ07699 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN1BQ07699 AC010680.1-201ENST00000590024 3590 ntBASIC3.13□□□□□ -1.91
SCN1BQ07699 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN1BQ07699 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN1BQ07699 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SCN1BQ07699 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms