Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.19□□□□□ -2.06
ACTBP60709 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.19□□□□□ -2.06
ACTBP60709 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.19□□□□□ -2.06
ACTBP60709 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.19□□□□□ -2.06
ACTBP60709 SULT1C2P1-202ENST00000562418 459 ntBASIC2.19□□□□□ -2.06
ACTBP60709 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.19□□□□□ -2.06
ACTBP60709 AC013444.2-201ENST00000603317 787 ntBASIC2.19□□□□□ -2.06
ACTBP60709 RPL23AP92-201ENST00000603609 255 ntBASIC2.19□□□□□ -2.06
ACTBP60709 AL355877.2-201ENST00000603670 358 ntBASIC2.19□□□□□ -2.06
ACTBP60709 AL137847.3-201ENST00000611521 109 ntBASIC2.19□□□□□ -2.06
ACTBP60709 MIR7106-201ENST00000612419 65 ntBASIC2.19□□□□□ -2.06
ACTBP60709 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.19□□□□□ -2.06
ACTBP60709 AC091925.2-201ENST00000625059 256 ntBASIC2.19□□□□□ -2.06
ACTBP60709 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
ACTBP60709 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
ACTBP60709 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ACTBP60709 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ACTBP60709 RNU6-792P-201ENST00000363490 107 ntBASIC2.18□□□□□ -2.06
ACTBP60709 RN7SKP226-201ENST00000364912 300 ntBASIC2.18□□□□□ -2.06
ACTBP60709 RNU6-1035P-201ENST00000384477 107 ntBASIC2.18□□□□□ -2.06
ACTBP60709 SNORD116-23-201ENST00000384645 92 ntBASIC2.18□□□□□ -2.06
ACTBP60709 SNORA80E-201ENST00000384744 137 ntBASIC2.18□□□□□ -2.06
ACTBP60709 U3.20-201ENST00000390909 217 ntBASIC2.18□□□□□ -2.06
ACTBP60709 RNU6-882P-201ENST00000391025 103 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AL445183.3-201ENST00000414168 502 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AC008173.1-201ENST00000418901 264 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
ACTBP60709 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.18□□□□□ -2.06
ACTBP60709 MTCO2P17-201ENST00000424336 677 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AC007560.1-201ENST00000426912 237 ntBASIC2.18□□□□□ -2.06
ACTBP60709 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 AL714022.1-201ENST00000439897 151 ntBASIC2.18□□□□□ -2.06
ACTBP60709 PGBD4P3-201ENST00000440731 581 ntBASIC2.18□□□□□ -2.06
ACTBP60709 MTCYBP3-201ENST00000445588 1137 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.18□□□□□ -2.06
ACTBP60709 WASF1P1-201ENST00000447560 1131 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AL050341.1-201ENST00000447743 313 ntBASIC2.18□□□□□ -2.06
ACTBP60709 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 AC078857.1-201ENST00000469870 667 ntBASIC2.18□□□□□ -2.06
ACTBP60709 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.18□□□□□ -2.06
ACTBP60709 AC116337.2-201ENST00000477662 156 ntBASIC2.18□□□□□ -2.06
ACTBP60709 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.18□□□□□ -2.06
ACTBP60709 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.18□□□□□ -2.06
ACTBP60709 MRPS36P2-201ENST00000512569 299 ntBASIC2.18□□□□□ -2.06
ACTBP60709 RNU1-103P-201ENST00000516502 125 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.18□□□□□ -2.06
ACTBP60709 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.18□□□□□ -2.06
ACTBP60709 NDUFS5P6-201ENST00000529136 295 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.18□□□□□ -2.06
ACTBP60709 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.18□□□□□ -2.06
ACTBP60709 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 OR4H6P-202ENST00000603819 340 ntBASIC2.18□□□□□ -2.06
ACTBP60709 AC100814.1-201ENST00000606963 623 ntBASIC2.18□□□□□ -2.06
ACTBP60709 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTBP60709 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.18□□□□□ -2.06
ACTBP60709 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ACTBP60709 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ACTBP60709 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ACTBP60709 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.17□□□□□ -2.06
ACTBP60709 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
ACTBP60709 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ACTBP60709 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ACTBP60709 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ACTBP60709 UBE2V1P15-201ENST00000407776 448 ntBASIC2.17□□□□□ -2.06
ACTBP60709 RNU4-27P-201ENST00000410889 139 ntBASIC2.17□□□□□ -2.06
ACTBP60709 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.17□□□□□ -2.06
ACTBP60709 FCF1P2-201ENST00000415284 583 ntBASIC2.17□□□□□ -2.06
ACTBP60709 USP9YP20-201ENST00000419224 558 ntBASIC2.17□□□□□ -2.06
ACTBP60709 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.17□□□□□ -2.06
ACTBP60709 AC107083.1-201ENST00000439643 279 ntBASIC2.17□□□□□ -2.06
ACTBP60709 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ACTBP60709 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ACTBP60709 TPRKBP1-201ENST00000456243 481 ntBASIC2.17□□□□□ -2.06
ACTBP60709 RPL31P60-201ENST00000478450 367 ntBASIC2.17□□□□□ -2.06
ACTBP60709 MTCYBP17-201ENST00000503579 789 ntBASIC2.17□□□□□ -2.06
ACTBP60709 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.17□□□□□ -2.06
ACTBP60709 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.17□□□□□ -2.06
ACTBP60709 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.17□□□□□ -2.06
ACTBP60709 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ACTBP60709 CKS1BP7-201ENST00000522230 235 ntBASIC2.17□□□□□ -2.06
ACTBP60709 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.17□□□□□ -2.06
ACTBP60709 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.17□□□□□ -2.06
ACTBP60709 NIFKP8-201ENST00000560500 874 ntBASIC2.17□□□□□ -2.06
ACTBP60709 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.17□□□□□ -2.06
ACTBP60709 MTCO1P40-201ENST00000574371 625 ntBASIC2.17□□□□□ -2.06
ACTBP60709 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.17□□□□□ -2.06
ACTBP60709 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.17□□□□□ -2.06
ACTBP60709 ZNF92P2-201ENST00000600543 1059 ntBASIC2.17□□□□□ -2.06
ACTBP60709 AC005332.10-201ENST00000612725 619 ntBASIC2.17□□□□□ -2.06
ACTBP60709 AC025594.3-201ENST00000613068 790 ntBASIC2.17□□□□□ -2.06
ACTBP60709 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.17□□□□□ -2.06
ACTBP60709 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.17□□□□□ -2.06
ACTBP60709 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.17□□□□□ -2.06
ACTBP60709 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ACTBP60709 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms