Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLRN1P58418 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLRN1P58418 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CLRN1P58418 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN1P58418 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.04□□□□□ -1.76
CLRN1P58418 TPTE2P4-201ENST00000258589 1605 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 SNORA63-201ENST00000363450 132 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN1P58418 Y_RNA.384-201ENST00000383909 102 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 Y_RNA.530-201ENST00000384587 101 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 MIR195-201ENST00000385194 87 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 RNU6-550P-201ENST00000391057 101 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 SDHCP2-201ENST00000398565 501 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC110754.1-201ENST00000399740 601 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 NDUFS5P1-201ENST00000405668 289 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 RNU2-43P-201ENST00000410306 190 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 RNU4-46P-201ENST00000410818 138 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 RNU6-387P-201ENST00000411331 105 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.04□□□□□ -1.76
CLRN1P58418 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.04□□□□□ -1.76
CLRN1P58418 SAR1AP4-201ENST00000429225 591 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 KCTD9P3-201ENST00000434597 1169 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 RPL23AP93-201ENST00000440847 484 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.04□□□□□ -1.76
CLRN1P58418 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN1P58418 RPS11P1-201ENST00000451072 473 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC004801.2-202ENST00000463559 283 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 MTND4P17-201ENST00000470444 350 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 RN7SL41P-201ENST00000476144 297 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC012158.1-204ENST00000483430 465 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 VN1R105P-201ENST00000486595 910 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CLRN1P58418 AC108145.1-201ENST00000503770 153 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC098591.2-201ENST00000510152 315 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.04□□□□□ -1.76
CLRN1P58418 RNU4-60P-201ENST00000517239 135 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN1P58418 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.04□□□□□ -1.76
CLRN1P58418 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.04□□□□□ -1.76
CLRN1P58418 AP001804.3-201ENST00000525146 880 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC093012.1-202ENST00000549403 582 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AL442663.2-201ENST00000554385 511 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 HNRNPCP4-201ENST00000571636 900 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.04□□□□□ -1.76
CLRN1P58418 MIR4480-201ENST00000582492 71 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN1P58418 AC008521.1-201ENST00000587471 187 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC078795.3-201ENST00000602913 472 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AL161729.3-201ENST00000603533 673 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN1P58418 AL133255.1-201ENST00000606374 441 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AL022345.1-201ENST00000607292 135 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.04□□□□□ -1.76
CLRN1P58418 MIR6730-201ENST00000622213 67 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 AL357559.1-201ENST00000622228 274 ntBASIC4.04□□□□□ -1.76
CLRN1P58418 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.04□□□□□ -1.76
CLRN1P58418 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN1P58418 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLRN1P58418 AC139769.1-204ENST00000472297 1931 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN1P58418 OR14L1P-202ENST00000641545 3009 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CLRN1P58418 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLRN1P58418 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN1P58418 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN1P58418 Y_RNA.167-201ENST00000363735 109 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 Y_RNA.301-201ENST00000364990 103 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 RNU1-63P-201ENST00000383902 164 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 Y_RNA.414-201ENST00000384011 101 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 Y_RNA.431-201ENST00000384086 102 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN1P58418 AL592114.1-201ENST00000403842 483 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.03□□□□□ -1.76
CLRN1P58418 PPP1R11P2-201ENST00000423543 382 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 MTCO2P12-201ENST00000427426 682 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 AC005534.2-201ENST00000431047 433 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.03□□□□□ -1.76
CLRN1P58418 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.03□□□□□ -1.76
CLRN1P58418 AC020550.1-201ENST00000447385 163 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 RNU7-66P-201ENST00000459469 62 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 RPL21P8-201ENST00000465083 535 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 Y_RNA.654-201ENST00000497848 106 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN1P58418 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN1P58418 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN1P58418 RNA5SP446-201ENST00000515955 82 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.03□□□□□ -1.76
CLRN1P58418 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
CLRN1P58418 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.03□□□□□ -1.76
CLRN1P58418 RANP3-201ENST00000530970 276 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.03□□□□□ -1.76
CLRN1P58418 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN1P58418 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.03□□□□□ -1.76
CLRN1P58418 BNIP3P25-201ENST00000596023 559 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 XIAPP1-201ENST00000603162 600 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.03□□□□□ -1.76
CLRN1P58418 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN1P58418 uc_338.15-201ENST00000615470 191 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 AC126177.8-201ENST00000618339 1015 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms