Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU6-996P-201ENST00000365438 107 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SUMO3P55854 SNORA24.1-201ENST00000384401 135 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 LAP3P1-201ENST00000403648 294 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AL591416.1-201ENST00000404015 867 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 MIR1179-201ENST00000408703 91 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 AL513331.1-201ENST00000411908 397 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 AL356867.1-201ENST00000429623 299 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 RPS29P17-201ENST00000430795 166 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 SEPT14P3-201ENST00000439401 183 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 NEFMP1-201ENST00000443423 1006 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 AL732372.2-207ENST00000445840 183 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 SEPT14P2-201ENST00000453405 183 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC079804.1-201ENST00000461922 436 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 GMFBP1-201ENST00000467831 427 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC078785.3-201ENST00000476607 425 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AL049874.1-201ENST00000489560 388 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.93□□□□□ -1.78
SUMO3P55854 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.93□□□□□ -1.78
SUMO3P55854 SEPT14P4-201ENST00000513445 186 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 SNORA31.3-201ENST00000516029 96 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 SCARNA15.2-201ENST00000516409 127 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 RNA5SP468-201ENST00000516782 93 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.93□□□□□ -1.78
SUMO3P55854 FO082796.1-201ENST00000523795 183 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.93□□□□□ -1.78
SUMO3P55854 OR5AL2P-201ENST00000532185 920 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.93□□□□□ -1.78
SUMO3P55854 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 CBX3P5-201ENST00000552017 521 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.93□□□□□ -1.78
SUMO3P55854 AC068831.4-201ENST00000556118 109 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.93□□□□□ -1.78
SUMO3P55854 AC008752.3-201ENST00000588113 712 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC068790.4-201ENST00000602474 263 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AL365204.3-201ENST00000612448 685 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC130324.3-201ENST00000614165 542 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SUMO3P55854 AL158196.1-201ENST00000616786 434 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SUMO3P55854 AL713922.2-201ENST00000619384 716 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SUMO3P55854 AC025034.2-201ENST00000623264 286 ntBASIC3.93□□□□□ -1.78
SUMO3P55854 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.93□□□□□ -1.78
SUMO3P55854 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SUMO3P55854 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SUMO3P55854 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SUMO3P55854 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SUMO3P55854 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SUMO3P55854 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SUMO3P55854 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SUMO3P55854 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
SUMO3P55854 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 RNU6-50P-201ENST00000362356 103 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 RNA5SP509-201ENST00000364577 119 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 Y_RNA.255-201ENST00000364581 97 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 RNU6-61P-201ENST00000365528 109 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 RNU6-877P-201ENST00000383868 107 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 SOD2P1-201ENST00000396543 562 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 RNU6-387P-201ENST00000411331 105 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.92□□□□□ -1.78
SUMO3P55854 NDUFB4P7-201ENST00000423198 363 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 RPL23AP52-201ENST00000439311 478 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 RPL23AP81-201ENST00000455252 467 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 RPL21P104-201ENST00000464143 478 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 AC022795.1-201ENST00000473808 480 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 AL163973.1-201ENST00000484753 577 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 AC104164.2-201ENST00000496953 495 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 PRDX4P1-201ENST00000507189 574 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 AC093840.1-201ENST00000511599 336 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 SNORA70.16-201ENST00000516390 95 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.92□□□□□ -1.78
SUMO3P55854 AC009643.1-201ENST00000532030 391 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.92□□□□□ -1.78
SUMO3P55854 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.92□□□□□ -1.78
SUMO3P55854 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.92□□□□□ -1.78
SUMO3P55854 MIR4284-201ENST00000578924 81 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.92□□□□□ -1.78
SUMO3P55854 AC067852.3-201ENST00000589177 561 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms