Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TAS2R15P-201ENST00000390674 928 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 RNA5SP129-201ENST00000410276 118 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 TOMM22P1-201ENST00000418578 312 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS2P54868 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.15□□□□□ -1.91
HMGCS2P54868 RPL7P34-201ENST00000433316 712 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 NEK4P1-201ENST00000433383 879 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 AL590103.1-201ENST00000434488 307 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 AL513043.1-201ENST00000439124 535 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 RPL18AP17-201ENST00000455326 198 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 MTCO2P6-201ENST00000463134 685 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 AC003982.1-202ENST00000469928 248 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.15□□□□□ -1.91
HMGCS2P54868 RPL7P18-201ENST00000478965 734 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS2P54868 RN7SKP43-201ENST00000516173 320 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 MTATP6P15-201ENST00000527233 835 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 SLC2A13P1-201ENST00000531560 322 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.15□□□□□ -1.91
HMGCS2P54868 ZNF321P-202ENST00000550843 495 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 LSM6P2-201ENST00000552208 177 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS2P54868 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.15□□□□□ -1.91
HMGCS2P54868 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS2P54868 AL669831.4-202ENST00000590817 238 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.15□□□□□ -1.91
HMGCS2P54868 AL353778.1-201ENST00000603149 408 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 AC120349.3-201ENST00000624377 529 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 AC019226.2-201ENST00000625973 424 ntBASIC3.15□□□□□ -1.91
HMGCS2P54868 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HMGCS2P54868 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGCS2P54868 AC004925.1-201ENST00000624256 2706 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS2P54868 AC005183.1-201ENST00000603687 1979 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS2P54868 RNVU1-3-201ENST00000364313 161 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 SNORA67.4-201ENST00000384688 142 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC016769.3-201ENST00000396562 315 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AL023807.1-201ENST00000407932 359 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 OR2AS1P-201ENST00000427827 319 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC112220.1-201ENST00000434628 355 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS2P54868 HMGN2P20-201ENST00000437531 273 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 MTCYBP31-201ENST00000438855 1122 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS2P54868 VN1R10P-201ENST00000447106 875 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 RPS24P6-201ENST00000452670 400 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS2P54868 TRBV26-201ENST00000456572 344 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS2P54868 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS2P54868 AC092757.1-201ENST00000467293 467 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS2P54868 PABPC1P3-201ENST00000469174 459 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC128713.1-201ENST00000471495 306 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC090525.1-201ENST00000479116 478 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC004263.1-201ENST00000479327 332 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS2P54868 MTCYBP17-201ENST00000503579 789 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
HMGCS2P54868 HSPE1P23-201ENST00000509838 286 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS2P54868 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.14□□□□□ -1.91
HMGCS2P54868 MTND3P12-201ENST00000559068 328 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC027176.1-201ENST00000560204 514 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
HMGCS2P54868 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS2P54868 AL139344.1-201ENST00000605228 195 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS2P54868 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS2P54868 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS2P54868 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS2P54868 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
HMGCS2P54868 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS2P54868 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS2P54868 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS2P54868 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS2P54868 ASNSP3-201ENST00000451989 1306 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 ZNF542P-204ENST00000482727 1305 ntBASIC3.14□□□□□ -1.91
HMGCS2P54868 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS2P54868 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS2P54868 RNU6-263P-201ENST00000363811 107 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 RNU6-730P-201ENST00000383954 104 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS2P54868 MIR887-201ENST00000401258 79 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 RNA5SP56-201ENST00000410277 118 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS2P54868 MTCO3P12-201ENST00000416718 547 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS2P54868 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS2P54868 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS2P54868 RPS25P9-201ENST00000435591 252 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HMGCS2P54868 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS2P54868 MTCYBP11-201ENST00000447254 1109 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS2P54868 HMGB3P8-201ENST00000449709 577 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AC092754.2-201ENST00000463506 460 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms