Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.07□□□□□ -1.76
COPB1P53618 AL590282.1-201ENST00000610379 1136 ntBASIC4.07□□□□□ -1.76
COPB1P53618 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COPB1P53618 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
COPB1P53618 AC091953.2-201ENST00000623979 160 ntBASIC4.07□□□□□ -1.76
COPB1P53618 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.07□□□□□ -1.76
COPB1P53618 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.07□□□□□ -1.76
COPB1P53618 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COPB1P53618 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.06□□□□□ -1.76
COPB1P53618 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COPB1P53618 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
COPB1P53618 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
COPB1P53618 AC024560.2-201ENST00000507981 1497 ntBASIC4.06□□□□□ -1.76
COPB1P53618 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COPB1P53618 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COPB1P53618 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.06□□□□□ -1.76
COPB1P53618 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COPB1P53618 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COPB1P53618 RNU5E-1-201ENST00000362477 120 ntBASIC4.06□□□□□ -1.76
COPB1P53618 RNU6-282P-201ENST00000365357 103 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
COPB1P53618 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COPB1P53618 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.06□□□□□ -1.76
COPB1P53618 AC004987.3-201ENST00000413879 771 ntBASIC4.06□□□□□ -1.76
COPB1P53618 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.06□□□□□ -1.76
COPB1P53618 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.06□□□□□ -1.76
COPB1P53618 RPL30P16-201ENST00000419341 429 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.06□□□□□ -1.76
COPB1P53618 AC133104.1-201ENST00000429100 218 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AL117339.2-201ENST00000430475 180 ntBASIC4.06□□□□□ -1.76
COPB1P53618 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.06□□□□□ -1.76
COPB1P53618 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.06□□□□□ -1.76
COPB1P53618 UBDP1-202ENST00000457888 382 ntBASIC4.06□□□□□ -1.76
COPB1P53618 RPL37P6-202ENST00000464216 403 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.06□□□□□ -1.76
COPB1P53618 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.06□□□□□ -1.76
COPB1P53618 AC107934.1-201ENST00000522215 217 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.06□□□□□ -1.76
COPB1P53618 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.06□□□□□ -1.76
COPB1P53618 AL845331.3-202ENST00000562856 261 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AL356432.3-201ENST00000568952 465 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AC067852.4-201ENST00000590314 478 ntBASIC4.06□□□□□ -1.76
COPB1P53618 BNIP3P30-201ENST00000601184 574 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AC010680.3-201ENST00000604215 520 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.06□□□□□ -1.76
COPB1P53618 AC017083.3-201ENST00000609955 700 ntBASIC4.06□□□□□ -1.76
COPB1P53618 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.06□□□□□ -1.76
COPB1P53618 AC079597.1-201ENST00000624306 508 ntBASIC4.06□□□□□ -1.76
COPB1P53618 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.06□□□□□ -1.76
COPB1P53618 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COPB1P53618 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.06□□□□□ -1.76
COPB1P53618 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
COPB1P53618 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COPB1P53618 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.05□□□□□ -1.76
COPB1P53618 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
COPB1P53618 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COPB1P53618 Y_RNA.1-201ENST00000352915 104 ntBASIC4.05□□□□□ -1.76
COPB1P53618 RNU6-181P-201ENST00000363225 107 ntBASIC4.05□□□□□ -1.76
COPB1P53618 RNU5E-4P-201ENST00000364931 120 ntBASIC4.05□□□□□ -1.76
COPB1P53618 RNU2-8P-201ENST00000410727 190 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 DPPA2P1-201ENST00000428060 556 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.05□□□□□ -1.76
COPB1P53618 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 AC108734.1-201ENST00000439549 399 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AL662791.1-201ENST00000441992 928 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AL162151.2-201ENST00000448875 158 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AL353691.1-201ENST00000451332 387 ntBASIC4.05□□□□□ -1.76
COPB1P53618 MTND2P24-201ENST00000453434 806 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC104308.1-201ENST00000454621 333 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 snoU13.8-201ENST00000458890 104 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC034236.1-201ENST00000469891 373 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AP000926.1-201ENST00000479573 241 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 FCF1P3-201ENST00000496394 590 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 AC074344.1-201ENST00000512823 224 ntBASIC4.05□□□□□ -1.76
COPB1P53618 NPM1P41-201ENST00000512920 831 ntBASIC4.05□□□□□ -1.76
COPB1P53618 RNU6-445P-201ENST00000516949 107 ntBASIC4.05□□□□□ -1.76
COPB1P53618 RNU1-45P-201ENST00000517191 141 ntBASIC4.05□□□□□ -1.76
COPB1P53618 IGKV2D-23-201ENST00000518179 286 ntBASIC4.05□□□□□ -1.76
COPB1P53618 IGKV2D-36-201ENST00000518643 226 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC022790.1-201ENST00000522872 204 ntBASIC4.05□□□□□ -1.76
COPB1P53618 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 CBX3P5-201ENST00000552017 521 ntBASIC4.05□□□□□ -1.76
COPB1P53618 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 MIR3167-201ENST00000579623 85 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 AC006130.2-201ENST00000586202 326 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.05□□□□□ -1.76
COPB1P53618 AP000907.4-201ENST00000604143 237 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms