Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.34□□□□□ -1.87
PDX1P52945 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
PDX1P52945 AC068724.1-201ENST00000487100 792 ntBASIC3.34□□□□□ -1.87
PDX1P52945 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.34□□□□□ -1.87
PDX1P52945 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.34□□□□□ -1.87
PDX1P52945 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.34□□□□□ -1.87
PDX1P52945 RN7SKP244-201ENST00000516513 307 ntBASIC3.34□□□□□ -1.87
PDX1P52945 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.34□□□□□ -1.87
PDX1P52945 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.34□□□□□ -1.87
PDX1P52945 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.87
PDX1P52945 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.34□□□□□ -1.87
PDX1P52945 AC083760.1-201ENST00000589621 670 ntBASIC3.34□□□□□ -1.87
PDX1P52945 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PDX1P52945 AL606834.2-201ENST00000602954 668 ntBASIC3.34□□□□□ -1.87
PDX1P52945 AC012360.2-201ENST00000609349 391 ntBASIC3.34□□□□□ -1.87
PDX1P52945 C2orf27A-204ENST00000623058 969 ntBASIC3.34□□□□□ -1.87
PDX1P52945 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
PDX1P52945 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PDX1P52945 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.34□□□□□ -1.88
PDX1P52945 MTND5P33-201ENST00000571250 1450 ntBASIC3.34□□□□□ -1.88
PDX1P52945 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
PDX1P52945 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDX1P52945 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDX1P52945 AC092125.1-201ENST00000562568 1995 ntBASIC3.33□□□□□ -1.88
PDX1P52945 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.33□□□□□ -1.88
PDX1P52945 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDX1P52945 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDX1P52945 RNU6-600P-201ENST00000362524 99 ntBASIC3.33□□□□□ -1.88
PDX1P52945 RNA5SP374-201ENST00000362939 125 ntBASIC3.33□□□□□ -1.88
PDX1P52945 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDX1P52945 RNU6-1074P-201ENST00000383995 104 ntBASIC3.33□□□□□ -1.88
PDX1P52945 SNORA48.5-201ENST00000391143 135 ntBASIC3.33□□□□□ -1.88
PDX1P52945 RPS20P2-201ENST00000402520 389 ntBASIC3.33□□□□□ -1.88
PDX1P52945 AL359704.1-201ENST00000411586 781 ntBASIC3.33□□□□□ -1.88
PDX1P52945 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.33□□□□□ -1.88
PDX1P52945 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.33□□□□□ -1.88
PDX1P52945 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.33□□□□□ -1.88
PDX1P52945 AC098826.1-201ENST00000433943 471 ntBASIC3.33□□□□□ -1.88
PDX1P52945 THAP5P1-201ENST00000439089 262 ntBASIC3.33□□□□□ -1.88
PDX1P52945 AC108734.1-201ENST00000439549 399 ntBASIC3.33□□□□□ -1.88
PDX1P52945 AC112653.1-201ENST00000443851 386 ntBASIC3.33□□□□□ -1.88
PDX1P52945 Z75741.1-201ENST00000446793 314 ntBASIC3.33□□□□□ -1.88
PDX1P52945 ANP32BP2-201ENST00000454525 545 ntBASIC3.33□□□□□ -1.88
PDX1P52945 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.33□□□□□ -1.88
PDX1P52945 RN7SL504P-201ENST00000494496 287 ntBASIC3.33□□□□□ -1.88
PDX1P52945 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.33□□□□□ -1.88
PDX1P52945 Y_RNA.695-201ENST00000516715 107 ntBASIC3.33□□□□□ -1.88
PDX1P52945 RNU6-579P-201ENST00000516879 102 ntBASIC3.33□□□□□ -1.88
PDX1P52945 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.33□□□□□ -1.88
PDX1P52945 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDX1P52945 AC007115.1-201ENST00000546853 234 ntBASIC3.33□□□□□ -1.88
PDX1P52945 ZNF519P3-201ENST00000557158 1032 ntBASIC3.33□□□□□ -1.88
PDX1P52945 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.33□□□□□ -1.88
PDX1P52945 AP001429.1-201ENST00000602568 530 ntBASIC3.33□□□□□ -1.88
PDX1P52945 AC009090.3-201ENST00000616553 565 ntBASIC3.33□□□□□ -1.88
PDX1P52945 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PDX1P52945 AC012150.2-201ENST00000621300 544 ntBASIC3.33□□□□□ -1.88
PDX1P52945 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.33□□□□□ -1.88
PDX1P52945 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.33□□□□□ -1.88
PDX1P52945 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDX1P52945 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.33□□□□□ -1.88
PDX1P52945 AP001350.1-201ENST00000601906 1524 ntBASIC3.33□□□□□ -1.88
PDX1P52945 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.33□□□□□ -1.88
PDX1P52945 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.33□□□□□ -1.88
PDX1P52945 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PDX1P52945 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 OTUD4P1-201ENST00000237841 3067 ntBASIC3.32□□□□□ -1.88
PDX1P52945 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 RNA5SP167-201ENST00000365461 116 ntBASIC3.32□□□□□ -1.88
PDX1P52945 RNU6-533P-201ENST00000384144 107 ntBASIC3.32□□□□□ -1.88
PDX1P52945 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PDX1P52945 U3.19-201ENST00000390893 196 ntBASIC3.32□□□□□ -1.88
PDX1P52945 U3.20-201ENST00000390909 217 ntBASIC3.32□□□□□ -1.88
PDX1P52945 RN7SKP111-201ENST00000410349 271 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.32□□□□□ -1.88
PDX1P52945 AC078974.1-201ENST00000411597 223 ntBASIC3.32□□□□□ -1.88
PDX1P52945 RPL17P12-201ENST00000413391 526 ntBASIC3.32□□□□□ -1.88
PDX1P52945 MTCO3P12-201ENST00000416718 547 ntBASIC3.32□□□□□ -1.88
PDX1P52945 SEPT2P1-201ENST00000419651 180 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AL159169.1-201ENST00000421119 127 ntBASIC3.32□□□□□ -1.88
PDX1P52945 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.32□□□□□ -1.88
PDX1P52945 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.32□□□□□ -1.88
PDX1P52945 MTND1P28-201ENST00000435623 950 ntBASIC3.32□□□□□ -1.88
PDX1P52945 FTH1P1-201ENST00000437933 532 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AL138799.3-201ENST00000438968 350 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AL360221.1-201ENST00000445989 335 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC009961.3-201ENST00000449832 765 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.32□□□□□ -1.88
PDX1P52945 AC116337.2-201ENST00000477662 156 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AL049873.1-201ENST00000480540 376 ntBASIC3.32□□□□□ -1.88
PDX1P52945 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.32□□□□□ -1.88
PDX1P52945 AC005921.1-201ENST00000510589 286 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC091965.2-201ENST00000512324 613 ntBASIC3.32□□□□□ -1.88
PDX1P52945 SNORA70.14-201ENST00000516205 110 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AP006245.1-201ENST00000522549 120 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms