Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MSH6P52701 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
MSH6P52701 MAPK10-322ENST00000641485 4530 ntBASIC3.08□□□□□ -1.92
MSH6P52701 AC097714.1-201ENST00000511272 1647 ntBASIC3.08□□□□□ -1.92
MSH6P52701 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.08□□□□□ -1.92
MSH6P52701 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.08□□□□□ -1.92
MSH6P52701 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
MSH6P52701 RNU6-468P-201ENST00000384003 109 ntBASIC3.07□□□□□ -1.92
MSH6P52701 MIR607-201ENST00000385241 96 ntBASIC3.07□□□□□ -1.92
MSH6P52701 SNORA17.3-201ENST00000391159 129 ntBASIC3.07□□□□□ -1.92
MSH6P52701 FAT1P1-201ENST00000406588 507 ntBASIC3.07□□□□□ -1.92
MSH6P52701 RNU6-321P-201ENST00000410912 106 ntBASIC3.07□□□□□ -1.92
MSH6P52701 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.07□□□□□ -1.92
MSH6P52701 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.07□□□□□ -1.92
MSH6P52701 PTP4A1P7-201ENST00000423476 514 ntBASIC3.07□□□□□ -1.92
MSH6P52701 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.07□□□□□ -1.92
MSH6P52701 Z99714.1-201ENST00000450463 807 ntBASIC3.07□□□□□ -1.92
MSH6P52701 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.07□□□□□ -1.92
MSH6P52701 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.07□□□□□ -1.92
MSH6P52701 AC011352.3-201ENST00000505162 593 ntBASIC3.07□□□□□ -1.92
MSH6P52701 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.07□□□□□ -1.92
MSH6P52701 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.07□□□□□ -1.92
MSH6P52701 RNU5A-7P-201ENST00000515979 116 ntBASIC3.07□□□□□ -1.92
MSH6P52701 SCARNA16.3-201ENST00000516595 184 ntBASIC3.07□□□□□ -1.92
MSH6P52701 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
MSH6P52701 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.07□□□□□ -1.92
MSH6P52701 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
MSH6P52701 AC012182.1-201ENST00000570133 895 ntBASIC3.07□□□□□ -1.92
MSH6P52701 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.07□□□□□ -1.92
MSH6P52701 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.07□□□□□ -1.92
MSH6P52701 AC103710.1-201ENST00000610003 901 ntBASIC3.07□□□□□ -1.92
MSH6P52701 AC131902.3-201ENST00000611767 581 ntBASIC3.07□□□□□ -1.92
MSH6P52701 MIR6132-201ENST00000622083 109 ntBASIC3.07□□□□□ -1.92
MSH6P52701 BX649567.1-201ENST00000642071 1134 ntBASIC3.07□□□□□ -1.92
MSH6P52701 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
MSH6P52701 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MSH6P52701 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.07□□□□□ -1.92
MSH6P52701 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
MSH6P52701 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MSH6P52701 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
MSH6P52701 FRG1BP-201ENST00000278882 761 ntBASIC3.06□□□□□ -1.92
MSH6P52701 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
MSH6P52701 OR1L1-202ENST00000373686 1083 ntBASIC3.06□□□□□ -1.92
MSH6P52701 DEFA7P-201ENST00000382676 285 ntBASIC3.06□□□□□ -1.92
MSH6P52701 Y_RNA.466-201ENST00000384294 113 ntBASIC3.06□□□□□ -1.92
MSH6P52701 SNORA40.4-201ENST00000390971 128 ntBASIC3.06□□□□□ -1.92
MSH6P52701 SSXP10-201ENST00000402595 565 ntBASIC3.06□□□□□ -1.92
MSH6P52701 SFR1P1-201ENST00000403720 688 ntBASIC3.06□□□□□ -1.92
MSH6P52701 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
MSH6P52701 RPL23AP47-201ENST00000408017 460 ntBASIC3.06□□□□□ -1.92
MSH6P52701 MIR1250-201ENST00000408098 113 ntBASIC3.06□□□□□ -1.92
MSH6P52701 AC114973.1-201ENST00000429057 632 ntBASIC3.06□□□□□ -1.92
MSH6P52701 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH6P52701 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH6P52701 ARPC3P2-201ENST00000457786 533 ntBASIC3.06□□□□□ -1.92
MSH6P52701 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MSH6P52701 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MSH6P52701 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MSH6P52701 AC118282.2-201ENST00000508739 374 ntBASIC3.06□□□□□ -1.92
MSH6P52701 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MSH6P52701 RNA5SP200-201ENST00000516360 103 ntBASIC3.06□□□□□ -1.92
MSH6P52701 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
MSH6P52701 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH6P52701 AC092451.2-201ENST00000538746 658 ntBASIC3.06□□□□□ -1.92
MSH6P52701 AK6P1-201ENST00000540219 478 ntBASIC3.06□□□□□ -1.92
MSH6P52701 AC092470.1-201ENST00000546187 132 ntBASIC3.06□□□□□ -1.92
MSH6P52701 AC074051.3-201ENST00000570238 358 ntBASIC3.06□□□□□ -1.92
MSH6P52701 MIR8070-201ENST00000616510 88 ntBASIC3.06□□□□□ -1.92
MSH6P52701 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
MSH6P52701 AC098679.5-201ENST00000624394 571 ntBASIC3.06□□□□□ -1.92
MSH6P52701 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.06□□□□□ -1.92
MSH6P52701 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.06□□□□□ -1.92
MSH6P52701 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.05□□□□□ -1.92
MSH6P52701 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
MSH6P52701 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.05□□□□□ -1.92
MSH6P52701 MIR583-201ENST00000384846 75 ntBASIC3.05□□□□□ -1.92
MSH6P52701 MTCYBP24-201ENST00000420387 1106 ntBASIC3.05□□□□□ -1.92
MSH6P52701 SFR1P2-201ENST00000421841 730 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AC096632.1-201ENST00000427395 310 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AC234064.1-201ENST00000436312 247 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.05□□□□□ -1.92
MSH6P52701 SEPT14P24-201ENST00000447236 180 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AP000705.1-201ENST00000454567 350 ntBASIC3.05□□□□□ -1.92
MSH6P52701 NF1P3-201ENST00000457709 450 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AC012181.1-201ENST00000479895 423 ntBASIC3.05□□□□□ -1.92
MSH6P52701 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.05□□□□□ -1.92
MSH6P52701 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.05□□□□□ -1.92
MSH6P52701 AP003355.1-201ENST00000518956 587 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.05□□□□□ -1.92
MSH6P52701 AC004486.1-201ENST00000546846 233 ntBASIC3.05□□□□□ -1.92
MSH6P52701 SYF2P1-201ENST00000550658 413 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AL163153.1-201ENST00000554223 283 ntBASIC3.05□□□□□ -1.92
MSH6P52701 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.05□□□□□ -1.92
MSH6P52701 AL359198.2-201ENST00000611836 194 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AC008759.3-201ENST00000613300 508 ntBASIC3.05□□□□□ -1.92
MSH6P52701 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.05□□□□□ -1.92
MSH6P52701 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
MSH6P52701 AC005539.1-201ENST00000443768 1479 ntBASIC3.05□□□□□ -1.92
MSH6P52701 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.05□□□□□ -1.92
MSH6P52701 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms