Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RPL7P28-201ENST00000437739 740 ntBASIC4.12□□□□□ -1.75
NEK3P51956 RPS4XP4-201ENST00000443195 763 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AC009237.8-201ENST00000445492 379 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AC140076.1-201ENST00000449897 361 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.12□□□□□ -1.75
NEK3P51956 ANP32BP2-201ENST00000454525 545 ntBASIC4.12□□□□□ -1.75
NEK3P51956 RPS20P22-201ENST00000473700 357 ntBASIC4.12□□□□□ -1.75
NEK3P51956 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.12□□□□□ -1.75
NEK3P51956 RNU6-390P-201ENST00000516259 103 ntBASIC4.12□□□□□ -1.75
NEK3P51956 Vault.3-201ENST00000516676 95 ntBASIC4.12□□□□□ -1.75
NEK3P51956 RNA5SP143-201ENST00000516936 115 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.12□□□□□ -1.75
NEK3P51956 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.12□□□□□ -1.75
NEK3P51956 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.12□□□□□ -1.75
NEK3P51956 RPS3AP4-201ENST00000555161 764 ntBASIC4.12□□□□□ -1.75
NEK3P51956 MIR5684-201ENST00000585074 65 ntBASIC4.12□□□□□ -1.75
NEK3P51956 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NEK3P51956 AC245014.2-201ENST00000603689 287 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AC246785.4-201ENST00000605374 287 ntBASIC4.12□□□□□ -1.75
NEK3P51956 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK3P51956 AC009570.1-201ENST00000609599 745 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AC103710.2-201ENST00000609912 942 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AC090132.2-201ENST00000615881 347 ntBASIC4.12□□□□□ -1.75
NEK3P51956 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.12□□□□□ -1.75
NEK3P51956 AC006338.1-201ENST00000618453 749 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AC068137.4-201ENST00000638485 296 ntBASIC4.12□□□□□ -1.75
NEK3P51956 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
NEK3P51956 OR4G2P-202ENST00000641004 1759 ntBASIC4.12□□□□□ -1.75
NEK3P51956 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NEK3P51956 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.11□□□□□ -1.75
NEK3P51956 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEK3P51956 RNU5E-1-201ENST00000362477 120 ntBASIC4.11□□□□□ -1.75
NEK3P51956 RNY4P34-201ENST00000364779 95 ntBASIC4.11□□□□□ -1.75
NEK3P51956 RNU6-348P-201ENST00000384386 107 ntBASIC4.11□□□□□ -1.75
NEK3P51956 SNORA1.3-201ENST00000384676 136 ntBASIC4.11□□□□□ -1.75
NEK3P51956 RNU6-1197P-201ENST00000391183 107 ntBASIC4.11□□□□□ -1.75
NEK3P51956 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.11□□□□□ -1.75
NEK3P51956 RN7SKP140-201ENST00000411196 284 ntBASIC4.11□□□□□ -1.75
NEK3P51956 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK3P51956 ZNF90P2-204ENST00000419323 1075 ntBASIC4.11□□□□□ -1.75
NEK3P51956 OR5BE1P-201ENST00000425977 939 ntBASIC4.11□□□□□ -1.75
NEK3P51956 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK3P51956 AC087650.1-201ENST00000431445 468 ntBASIC4.11□□□□□ -1.75
NEK3P51956 ATP5HP2-201ENST00000433885 485 ntBASIC4.11□□□□□ -1.75
NEK3P51956 TAAR7P-201ENST00000436141 242 ntBASIC4.11□□□□□ -1.75
NEK3P51956 ARPC3P1-201ENST00000437218 533 ntBASIC4.11□□□□□ -1.75
NEK3P51956 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK3P51956 RPL31P60-201ENST00000478450 367 ntBASIC4.11□□□□□ -1.75
NEK3P51956 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK3P51956 RN7SKP298-201ENST00000515950 94 ntBASIC4.11□□□□□ -1.75
NEK3P51956 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK3P51956 OR5G4P-201ENST00000525251 760 ntBASIC4.11□□□□□ -1.75
NEK3P51956 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK3P51956 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.11□□□□□ -1.75
NEK3P51956 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK3P51956 AC106785.1-201ENST00000565935 262 ntBASIC4.11□□□□□ -1.75
NEK3P51956 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.11□□□□□ -1.75
NEK3P51956 MIR4528-201ENST00000577763 90 ntBASIC4.11□□□□□ -1.75
NEK3P51956 AC093227.2-201ENST00000589357 285 ntBASIC4.11□□□□□ -1.75
NEK3P51956 AC068790.2-201ENST00000602601 557 ntBASIC4.11□□□□□ -1.75
NEK3P51956 MIR486-1-201ENST00000612171 68 ntBASIC4.11□□□□□ -1.75
NEK3P51956 MIR6875-201ENST00000617506 72 ntBASIC4.11□□□□□ -1.75
NEK3P51956 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.11□□□□□ -1.75
NEK3P51956 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK3P51956 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
NEK3P51956 OR5BE1P-202ENST00000641168 1176 ntBASIC4.11□□□□□ -1.75
NEK3P51956 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.11□□□□□ -1.75
NEK3P51956 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEK3P51956 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEK3P51956 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEK3P51956 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NEK3P51956 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEK3P51956 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK3P51956 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEK3P51956 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEK3P51956 HSPA8P1-201ENST00000425843 1833 ntBASIC4.1□□□□□ -1.75
NEK3P51956 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEK3P51956 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.1□□□□□ -1.75
NEK3P51956 RN7SKP280-201ENST00000364196 304 ntBASIC4.1□□□□□ -1.75
NEK3P51956 RNU1-39P-201ENST00000383897 165 ntBASIC4.1□□□□□ -1.75
NEK3P51956 RNU6-1042P-201ENST00000384204 107 ntBASIC4.1□□□□□ -1.75
NEK3P51956 AL590704.1-201ENST00000402856 794 ntBASIC4.1□□□□□ -1.75
NEK3P51956 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NEK3P51956 AL445189.1-201ENST00000405722 338 ntBASIC4.1□□□□□ -1.75
NEK3P51956 FAT1P1-201ENST00000406588 507 ntBASIC4.1□□□□□ -1.75
NEK3P51956 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK3P51956 RNU4-6P-201ENST00000410804 122 ntBASIC4.1□□□□□ -1.75
NEK3P51956 HMGB3P23-201ENST00000414981 585 ntBASIC4.1□□□□□ -1.75
NEK3P51956 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.1□□□□□ -1.75
NEK3P51956 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 GAPDHP27-201ENST00000447427 1020 ntBASIC4.1□□□□□ -1.75
NEK3P51956 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.1□□□□□ -1.75
NEK3P51956 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 AC078785.3-201ENST00000476607 425 ntBASIC4.1□□□□□ -1.75
NEK3P51956 RBM43P1-201ENST00000476891 1081 ntBASIC4.1□□□□□ -1.75
NEK3P51956 RN7SL432P-201ENST00000484057 298 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms