Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCNKAP51800 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCNKAP51800 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCNKAP51800 MTND5P29-201ENST00000458676 1807 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCNKAP51800 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CLCNKAP51800 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 RNU6-192P-201ENST00000391253 100 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC007256.1-201ENST00000392253 2765 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 RPL7P25-201ENST00000404151 721 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 CCNG1P1-201ENST00000406783 885 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 RNU2-66P-201ENST00000410650 161 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC078974.1-201ENST00000411597 223 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC006548.1-201ENST00000427470 102 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC091286.1-201ENST00000431233 461 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 NDUFB1P1-201ENST00000435191 180 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCNKAP51800 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC244505.5-201ENST00000443639 207 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.57□□□□□ -1.84
CLCNKAP51800 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.57□□□□□ -1.84
CLCNKAP51800 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC021382.1-201ENST00000483523 359 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC096751.1-202ENST00000502691 1067 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCNKAP51800 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 NDUFB4P2-201ENST00000509515 391 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC109464.2-201ENST00000510242 943 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC017037.2-201ENST00000513850 890 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 RNU6-579P-201ENST00000516879 102 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AP003392.2-201ENST00000527269 208 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AP003497.1-201ENST00000528472 562 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 AP003122.4-201ENST00000530980 758 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.57□□□□□ -1.84
CLCNKAP51800 MIR3913-1-201ENST00000577744 102 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCNKAP51800 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AC025165.5-201ENST00000602802 578 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AL136363.2-201ENST00000604173 851 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC004492.1-201ENST00000607036 742 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AL590099.1-201ENST00000615276 138 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC015540.1-201ENST00000615828 501 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLCNKAP51800 AL732618.1-201ENST00000623251 301 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC004925.1-201ENST00000624256 2706 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 AC079597.1-201ENST00000624306 508 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 CR381572.1-201ENST00000625098 102 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCNKAP51800 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 AL356274.2-201ENST00000624379 3752 ntBASIC3.57□□□□□ -1.84
CLCNKAP51800 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CLCNKAP51800 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLCNKAP51800 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCNKAP51800 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLCNKAP51800 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLCNKAP51800 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.56□□□□□ -1.84
CLCNKAP51800 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCNKAP51800 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLCNKAP51800 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCNKAP51800 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.56□□□□□ -1.84
CLCNKAP51800 Y_RNA.3-201ENST00000362331 103 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 RNU6-50P-201ENST00000362356 103 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 RNY4P24-201ENST00000362735 96 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLCNKAP51800 RNA5SP171-201ENST00000391071 115 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 RNU2-47P-201ENST00000410649 186 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 RPS3AP3-201ENST00000411933 242 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 AC104651.1-201ENST00000427559 735 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 BX890604.2-201ENST00000427883 474 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCNKAP51800 HSPD1P21-201ENST00000436541 245 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.56□□□□□ -1.84
CLCNKAP51800 PGBD4P3-201ENST00000440731 581 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCNKAP51800 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.56□□□□□ -1.84
CLCNKAP51800 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCNKAP51800 snoU109.1-201ENST00000459339 135 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 LARP1BP2-201ENST00000486594 519 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCNKAP51800 MTND2P33-201ENST00000506452 1031 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.56□□□□□ -1.84
CLCNKAP51800 MTCYBP20-201ENST00000524239 1129 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms