Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 RNU6-9-201ENST00000384776 107 ntBASIC3.01□□□□□ -1.93
SMARCA2P51531 RNU6-33P-201ENST00000384793 107 ntBASIC3.01□□□□□ -1.93
SMARCA2P51531 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.01□□□□□ -1.93
SMARCA2P51531 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.01□□□□□ -1.93
SMARCA2P51531 AC146507.1-201ENST00000468335 354 ntBASIC3.01□□□□□ -1.93
SMARCA2P51531 AC109471.1-201ENST00000511631 612 ntBASIC3.01□□□□□ -1.93
SMARCA2P51531 MTCO2P32-201ENST00000514865 403 ntBASIC3.01□□□□□ -1.93
SMARCA2P51531 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.01□□□□□ -1.93
SMARCA2P51531 RNU6-6P-201ENST00000606623 107 ntBASIC3.01□□□□□ -1.93
SMARCA2P51531 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SMARCA2P51531 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SMARCA2P51531 BX510359.4-201ENST00000423750 193 ntBASIC3□□□□□ -1.93
SMARCA2P51531 AC017099.1-201ENST00000448261 1028 ntBASIC3□□□□□ -1.93
SMARCA2P51531 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3□□□□□ -1.93
SMARCA2P51531 AC107398.1-201ENST00000486904 505 ntBASIC3□□□□□ -1.93
SMARCA2P51531 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3□□□□□ -1.93
SMARCA2P51531 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3□□□□□ -1.93
SMARCA2P51531 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3□□□□□ -1.93
SMARCA2P51531 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC3□□□□□ -1.93
SMARCA2P51531 POLR2J4-204ENST00000418424 324 ntBASIC3□□□□□ -1.93
SMARCA2P51531 WARS2P1-201ENST00000429678 537 ntBASIC3□□□□□ -1.93
SMARCA2P51531 ARPC3P1-201ENST00000437218 533 ntBASIC3□□□□□ -1.93
SMARCA2P51531 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3□□□□□ -1.93
SMARCA2P51531 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3□□□□□ -1.93
SMARCA2P51531 ATP5EP1-201ENST00000510257 156 ntBASIC3□□□□□ -1.93
SMARCA2P51531 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3□□□□□ -1.93
SMARCA2P51531 MTND4P23-201ENST00000447723 1363 ntBASIC2.99□□□□□ -1.93
SMARCA2P51531 TAS2R15P-201ENST00000390674 928 ntBASIC2.99□□□□□ -1.93
SMARCA2P51531 FO393413.1-201ENST00000402892 195 ntBASIC2.99□□□□□ -1.93
SMARCA2P51531 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SMARCA2P51531 BX682237.1-201ENST00000415016 335 ntBASIC2.99□□□□□ -1.93
SMARCA2P51531 RPS6P14-201ENST00000425165 719 ntBASIC2.99□□□□□ -1.93
SMARCA2P51531 AMD1P1-201ENST00000457220 922 ntBASIC2.99□□□□□ -1.93
SMARCA2P51531 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.99□□□□□ -1.93
SMARCA2P51531 RNA5SP220-201ENST00000516298 104 ntBASIC2.99□□□□□ -1.93
SMARCA2P51531 SNHG22-203ENST00000617833 660 ntBASIC2.99□□□□□ -1.93
SMARCA2P51531 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.99□□□□□ -1.93
SMARCA2P51531 RNU6-600P-201ENST00000362524 99 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 RNA5SP138-201ENST00000365098 114 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMARCA2P51531 MTND1P23-201ENST00000416931 372 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCA2P51531 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.98□□□□□ -1.93
SMARCA2P51531 SEM1P1-201ENST00000506694 209 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 RNU1-61P-201ENST00000516107 151 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCA2P51531 MIR4421-201ENST00000578133 69 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 FAM106CP-201ENST00000582212 507 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 RMST_6.1-201ENST00000611980 203 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 AP000676.4-201ENST00000624659 623 ntBASIC2.98□□□□□ -1.93
SMARCA2P51531 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.98□□□□□ -1.93
SMARCA2P51531 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCA2P51531 ZNF876P-202ENST00000398732 1485 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 RNU4-13P-201ENST00000364019 141 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 SNORA7.2-201ENST00000364446 145 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 SNORA16.1-201ENST00000364597 132 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 LSM1P1-201ENST00000438629 273 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 Z99714.1-201ENST00000450463 807 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 AC009474.2-201ENST00000451383 136 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 NF1P3-201ENST00000457709 450 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 AC008687.2-201ENST00000597865 520 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 KATNBL1P1-201ENST00000605192 748 ntBASIC2.97□□□□□ -1.93
SMARCA2P51531 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMARCA2P51531 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SMARCA2P51531 Y_RNA.354-201ENST00000365448 111 ntBASIC2.96□□□□□ -1.94
SMARCA2P51531 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.96□□□□□ -1.94
SMARCA2P51531 AC021146.7-201ENST00000509604 775 ntBASIC2.96□□□□□ -1.94
SMARCA2P51531 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.96□□□□□ -1.94
SMARCA2P51531 HMGB1P47-201ENST00000511281 589 ntBASIC2.96□□□□□ -1.94
SMARCA2P51531 AC011604.1-201ENST00000545978 196 ntBASIC2.96□□□□□ -1.94
SMARCA2P51531 DNAJC8P1-201ENST00000554535 372 ntBASIC2.96□□□□□ -1.94
SMARCA2P51531 AP003122.6-201ENST00000623831 495 ntBASIC2.96□□□□□ -1.94
SMARCA2P51531 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCA2P51531 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCA2P51531 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCA2P51531 AC093536.2-201ENST00000565257 1406 ntBASIC2.96□□□□□ -1.94
SMARCA2P51531 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCA2P51531 AL121972.1-201ENST00000402023 252 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.95□□□□□ -1.94
SMARCA2P51531 PAICSP7-201ENST00000419829 962 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCA2P51531 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCA2P51531 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.95□□□□□ -1.94
SMARCA2P51531 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.95□□□□□ -1.94
SMARCA2P51531 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCA2P51531 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCA2P51531 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCA2P51531 AC135279.1-201ENST00000543493 504 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 HSPE1P14-201ENST00000605812 302 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 AL390240.1-201ENST00000612950 384 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 AL590099.1-201ENST00000615276 138 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMARCA2P51531 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMARCA2P51531 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.95□□□□□ -1.94
SMARCA2P51531 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMARCA2P51531 MIR96-201ENST00000362288 78 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 Y_RNA.374-201ENST00000365606 101 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 RN7SKP101-201ENST00000411376 320 ntBASIC2.95□□□□□ -1.94
SMARCA2P51531 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms