Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 HIGD1AP17-201ENST00000554576 276 ntBASIC2.65□□□□□ -1.99
RFX3P48380 AL451007.1-201ENST00000595491 289 ntBASIC2.65□□□□□ -1.99
RFX3P48380 DUXAP11-201ENST00000603858 526 ntBASIC2.65□□□□□ -1.99
RFX3P48380 AC004853.1-201ENST00000604902 698 ntBASIC2.65□□□□□ -1.99
RFX3P48380 AL627309.6-201ENST00000606857 840 ntBASIC2.65□□□□□ -1.99
RFX3P48380 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.65□□□□□ -1.99
RFX3P48380 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.65□□□□□ -1.99
RFX3P48380 AC011330.2-201ENST00000621680 635 ntBASIC2.65□□□□□ -1.99
RFX3P48380 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RFX3P48380 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.65□□□□□ -1.99
RFX3P48380 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
RFX3P48380 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
RFX3P48380 FAM35BP-202ENST00000497389 3337 ntBASIC2.65□□□□□ -1.99
RFX3P48380 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.99
RFX3P48380 AC097714.1-201ENST00000511272 1647 ntBASIC2.64□□□□□ -1.99
RFX3P48380 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFX3P48380 AP003122.5-201ENST00000527668 3766 ntBASIC2.64□□□□□ -1.99
RFX3P48380 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
RFX3P48380 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RFX3P48380 RNU6-270P-201ENST00000364131 105 ntBASIC2.64□□□□□ -1.99
RFX3P48380 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RFX3P48380 DHFRP6-201ENST00000401776 268 ntBASIC2.64□□□□□ -1.99
RFX3P48380 RPS3AP24-201ENST00000407896 734 ntBASIC2.64□□□□□ -1.99
RFX3P48380 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFX3P48380 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.64□□□□□ -1.99
RFX3P48380 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX3P48380 RPL7P37-201ENST00000425095 738 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC234781.2-201ENST00000426370 994 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AL121871.1-201ENST00000443413 436 ntBASIC2.64□□□□□ -1.99
RFX3P48380 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.64□□□□□ -1.99
RFX3P48380 RPS29P26-201ENST00000477483 171 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC083906.5-201ENST00000503722 328 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC114981.1-201ENST00000503897 678 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC147055.4-201ENST00000504399 745 ntBASIC2.64□□□□□ -1.99
RFX3P48380 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.64□□□□□ -1.99
RFX3P48380 AC017037.2-201ENST00000513850 890 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX3P48380 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX3P48380 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.64□□□□□ -1.99
RFX3P48380 AC125611.2-201ENST00000551907 647 ntBASIC2.64□□□□□ -1.99
RFX3P48380 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.64□□□□□ -1.99
RFX3P48380 AC090695.1-201ENST00000561269 1222 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX3P48380 AC034105.3-201ENST00000565294 442 ntBASIC2.64□□□□□ -1.99
RFX3P48380 MIR3921-201ENST00000577308 85 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC069304.2-201ENST00000605154 435 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC093732.2-201ENST00000607950 274 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC104763.3-201ENST00000613765 618 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC090132.2-201ENST00000615881 347 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC002064.3-201ENST00000623448 346 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AL138960.2-201ENST00000625145 535 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AL137790.1-201ENST00000634283 177 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC110079.1-202ENST00000635213 138 ntBASIC2.64□□□□□ -1.99
RFX3P48380 MIR1322-201ENST00000638013 71 ntBASIC2.64□□□□□ -1.99
RFX3P48380 AC087359.1-201ENST00000508335 1740 ntBASIC2.64□□□□□ -1.99
RFX3P48380 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFX3P48380 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.64□□□□□ -1.99
RFX3P48380 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
RFX3P48380 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
RFX3P48380 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.63□□□□□ -1.99
RFX3P48380 SNORD21-201ENST00000383953 95 ntBASIC2.63□□□□□ -1.99
RFX3P48380 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RFX3P48380 U3.26-201ENST00000391236 204 ntBASIC2.63□□□□□ -1.99
RFX3P48380 RNU2-42P-201ENST00000410697 113 ntBASIC2.63□□□□□ -1.99
RFX3P48380 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.63□□□□□ -1.99
RFX3P48380 UBBP3-201ENST00000445497 241 ntBASIC2.63□□□□□ -1.99
RFX3P48380 AL358794.1-201ENST00000445689 381 ntBASIC2.63□□□□□ -1.99
RFX3P48380 Z96811.1-201ENST00000445880 108 ntBASIC2.63□□□□□ -1.99
RFX3P48380 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.63□□□□□ -1.99
RFX3P48380 OR6K1P-201ENST00000456766 971 ntBASIC2.63□□□□□ -1.99
RFX3P48380 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.63□□□□□ -1.99
RFX3P48380 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.63□□□□□ -1.99
RFX3P48380 RNU6-276P-201ENST00000516114 96 ntBASIC2.63□□□□□ -1.99
RFX3P48380 RN7SKP31-201ENST00000516354 278 ntBASIC2.63□□□□□ -1.99
RFX3P48380 RNU6-928P-201ENST00000516876 104 ntBASIC2.63□□□□□ -1.99
RFX3P48380 HPRT1P3-201ENST00000539521 576 ntBASIC2.63□□□□□ -1.99
RFX3P48380 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.63□□□□□ -1.99
RFX3P48380 SETP2-201ENST00000553886 926 ntBASIC2.63□□□□□ -1.99
RFX3P48380 YWHAZP1-201ENST00000556286 722 ntBASIC2.63□□□□□ -1.99
RFX3P48380 ACTR3BP3-201ENST00000565577 979 ntBASIC2.63□□□□□ -1.99
RFX3P48380 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.63□□□□□ -1.99
RFX3P48380 AC020895.1-201ENST00000595362 272 ntBASIC2.63□□□□□ -1.99
RFX3P48380 AC008739.2-201ENST00000597006 317 ntBASIC2.63□□□□□ -1.99
RFX3P48380 AF131215.7-201ENST00000602443 707 ntBASIC2.63□□□□□ -1.99
RFX3P48380 AL450472.3-201ENST00000615578 367 ntBASIC2.63□□□□□ -1.99
RFX3P48380 AC025588.4-201ENST00000615802 908 ntBASIC2.63□□□□□ -1.99
RFX3P48380 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RFX3P48380 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RFX3P48380 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
RFX3P48380 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RFX3P48380 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RFX3P48380 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RFX3P48380 Y_RNA.548-201ENST00000384656 105 ntBASIC2.62□□□□□ -1.99
RFX3P48380 VN1R51P-201ENST00000411675 945 ntBASIC2.62□□□□□ -1.99
RFX3P48380 AL592148.1-201ENST00000413568 445 ntBASIC2.62□□□□□ -1.99
RFX3P48380 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX3P48380 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.62□□□□□ -1.99
RFX3P48380 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.62□□□□□ -1.99
RFX3P48380 snoU13.28-201ENST00000459235 104 ntBASIC2.62□□□□□ -1.99
RFX3P48380 AC104982.1-201ENST00000478775 574 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms