Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR3908-201ENST00000579798 126 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.49□□□□□ -2.01
CXCL12P48061 AL022067.1-201ENST00000602426 454 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 DPRXP5-201ENST00000604662 539 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC073387.2-201ENST00000604797 784 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC091946.2-201ENST00000606105 291 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC009237.15-201ENST00000610252 501 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC009159.1-201ENST00000618386 642 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AL049777.1-201ENST00000622740 518 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC109454.4-201ENST00000623411 649 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC040168.1-201ENST00000623594 991 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AP003485.1-201ENST00000625093 753 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC004808.1-201ENST00000627671 721 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.49□□□□□ -2.01
CXCL12P48061 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.49□□□□□ -2.01
CXCL12P48061 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL12P48061 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL12P48061 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CXCL12P48061 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL12P48061 AP001350.1-201ENST00000601906 1524 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 Z99496.1-201ENST00000469424 1477 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.48□□□□□ -2.01
CXCL12P48061 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CXCL12P48061 SNORD114-1-201ENST00000362705 72 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 RNU6-1249P-201ENST00000363237 111 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CXCL12P48061 RNU6-224P-201ENST00000384055 107 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 RNU2-28P-201ENST00000410457 189 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 LUZP4P1-201ENST00000415420 344 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AL449283.1-202ENST00000418249 604 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 DPRXP1-201ENST00000426312 460 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 RNF2P1-201ENST00000442955 1010 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 RPL17P49-201ENST00000443728 411 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AC104058.1-201ENST00000448028 297 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL12P48061 HMGB1P25-201ENST00000468402 607 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CXCL12P48061 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.48□□□□□ -2.01
CXCL12P48061 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 ATP5F1P5-201ENST00000526403 760 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AC109635.4-202ENST00000531666 412 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.48□□□□□ -2.01
CXCL12P48061 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.48□□□□□ -2.01
CXCL12P48061 AC008127.2-201ENST00000549925 1075 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 TMF1P1-201ENST00000576058 373 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL12P48061 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.48□□□□□ -2.01
CXCL12P48061 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.48□□□□□ -2.01
CXCL12P48061 AL355812.1-201ENST00000603215 216 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AC112220.2-201ENST00000605513 533 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AC024060.1-201ENST00000607052 494 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AF129408.1-201ENST00000608767 431 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AP001521.1-201ENST00000609150 300 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AC018755.4-201ENST00000619715 454 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 AC079228.1-201ENST00000624774 1049 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 PISRT1-201ENST00000626175 531 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.48□□□□□ -2.01
CXCL12P48061 AC099654.8-201ENST00000637757 681 ntBASIC2.48□□□□□ -2.01
CXCL12P48061 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL12P48061 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
CXCL12P48061 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.47□□□□□ -2.01
CXCL12P48061 RNU1-100P-201ENST00000365255 165 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 RNU6-821P-201ENST00000390995 107 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 RNA5SP344-201ENST00000411081 104 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.47□□□□□ -2.01
CXCL12P48061 RPL21P66-201ENST00000426566 466 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 GTF2IP3-201ENST00000433887 494 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.47□□□□□ -2.01
CXCL12P48061 AC096638.1-201ENST00000444678 216 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AL034418.1-201ENST00000448675 860 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 RPS24P6-201ENST00000452670 400 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 MTND2P39-201ENST00000457230 764 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 RPS20P24-201ENST00000457473 361 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 RPL30P9-201ENST00000465586 330 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.47□□□□□ -2.01
CXCL12P48061 OR4G11P-201ENST00000492842 939 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL12P48061 MTND3P3-201ENST00000505004 126 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.47□□□□□ -2.01
CXCL12P48061 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.47□□□□□ -2.01
CXCL12P48061 RNU6-276P-201ENST00000516114 96 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AL133271.1-201ENST00000538229 291 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.47□□□□□ -2.01
CXCL12P48061 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.47□□□□□ -2.01
CXCL12P48061 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.47□□□□□ -2.01
CXCL12P48061 AC087481.2-201ENST00000565492 330 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AC138915.2-201ENST00000569776 97 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AC010975.3-201ENST00000618727 978 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.47□□□□□ -2.01
CXCL12P48061 AC084824.4-201ENST00000620106 731 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AC104985.3-201ENST00000623479 597 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CXCL12P48061 LRRC77P-213ENST00000637727 880 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 AC241585.2-209ENST00000638217 143 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CXCL12P48061 Z82195.2-201ENST00000612348 18351 ntBASIC2.47□□□□□ -2.01
CXCL12P48061 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CXCL12P48061 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CXCL12P48061 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms