Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MMP13P45452 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MMP13P45452 RNU4-1-201ENST00000363925 141 ntBASIC3.96□□□□□ -1.78
MMP13P45452 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MMP13P45452 RNU6-877P-201ENST00000383868 107 ntBASIC3.96□□□□□ -1.78
MMP13P45452 RNU6-444P-201ENST00000383988 108 ntBASIC3.96□□□□□ -1.78
MMP13P45452 SNORA70E-201ENST00000384492 135 ntBASIC3.96□□□□□ -1.78
MMP13P45452 MIR124-3-201ENST00000384866 87 ntBASIC3.96□□□□□ -1.78
MMP13P45452 RPL31P1-201ENST00000398116 372 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AL391417.1-201ENST00000404100 426 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AC078974.1-201ENST00000411597 223 ntBASIC3.96□□□□□ -1.78
MMP13P45452 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP13P45452 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP13P45452 AC008850.1-201ENST00000427546 362 ntBASIC3.96□□□□□ -1.78
MMP13P45452 GTF2IP20-201ENST00000431663 360 ntBASIC3.96□□□□□ -1.78
MMP13P45452 ARPC3P1-201ENST00000437218 533 ntBASIC3.96□□□□□ -1.78
MMP13P45452 RPS15AP9-201ENST00000439856 381 ntBASIC3.96□□□□□ -1.78
MMP13P45452 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.96□□□□□ -1.78
MMP13P45452 RPS29P31-201ENST00000446147 164 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP13P45452 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP13P45452 SNORD108-201ENST00000459332 71 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AC007182.2-201ENST00000489251 402 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP13P45452 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
MMP13P45452 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.96□□□□□ -1.78
MMP13P45452 RNU6-1231P-201ENST00000517185 103 ntBASIC3.96□□□□□ -1.78
MMP13P45452 COX6CP8-201ENST00000522620 226 ntBASIC3.96□□□□□ -1.78
MMP13P45452 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MMP13P45452 OR5AL2P-201ENST00000532185 920 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP13P45452 HPRT1P3-201ENST00000539521 576 ntBASIC3.96□□□□□ -1.78
MMP13P45452 TOMM20P2-201ENST00000540082 421 ntBASIC3.96□□□□□ -1.78
MMP13P45452 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP13P45452 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.96□□□□□ -1.78
MMP13P45452 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP13P45452 CBX3P5-201ENST00000552017 521 ntBASIC3.96□□□□□ -1.78
MMP13P45452 HIF1AP1-201ENST00000553642 175 ntBASIC3.96□□□□□ -1.78
MMP13P45452 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP13P45452 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.96□□□□□ -1.78
MMP13P45452 AL845331.3-202ENST00000562856 261 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP13P45452 RPS3AP23-202ENST00000574601 686 ntBASIC3.96□□□□□ -1.78
MMP13P45452 MIR3160-1-201ENST00000577972 85 ntBASIC3.96□□□□□ -1.78
MMP13P45452 MIR4286-201ENST00000580651 93 ntBASIC3.96□□□□□ -1.78
MMP13P45452 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.96□□□□□ -1.78
MMP13P45452 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP13P45452 TPMTP1-201ENST00000592307 737 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AC005255.1-201ENST00000593748 216 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AL009028.1-201ENST00000604895 802 ntBASIC3.96□□□□□ -1.78
MMP13P45452 RNA5SP108-201ENST00000605921 117 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AC068831.8-201ENST00000620171 435 ntBASIC3.96□□□□□ -1.78
MMP13P45452 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP13P45452 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP13P45452 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP13P45452 AC024614.3-201ENST00000637860 256 ntBASIC3.96□□□□□ -1.78
MMP13P45452 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MMP13P45452 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
MMP13P45452 AC024560.2-201ENST00000507981 1497 ntBASIC3.96□□□□□ -1.78
MMP13P45452 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.96□□□□□ -1.78
MMP13P45452 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
MMP13P45452 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MMP13P45452 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP13P45452 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MMP13P45452 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP13P45452 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MMP13P45452 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
MMP13P45452 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP13P45452 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
MMP13P45452 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP13P45452 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
MMP13P45452 NMD3P1-201ENST00000439704 1488 ntBASIC3.95□□□□□ -1.78
MMP13P45452 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP13P45452 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP13P45452 RNU6-451P-201ENST00000362921 107 ntBASIC3.95□□□□□ -1.78
MMP13P45452 Y_RNA.394-201ENST00000383942 103 ntBASIC3.95□□□□□ -1.78
MMP13P45452 RNU6-213P-201ENST00000384051 104 ntBASIC3.95□□□□□ -1.78
MMP13P45452 Y_RNA.573-201ENST00000384763 105 ntBASIC3.95□□□□□ -1.78
MMP13P45452 MIR153-1-201ENST00000384914 90 ntBASIC3.95□□□□□ -1.78
MMP13P45452 EIF5P1-201ENST00000400019 1231 ntBASIC3.95□□□□□ -1.78
MMP13P45452 RPL36AP36-201ENST00000418616 301 ntBASIC3.95□□□□□ -1.78
MMP13P45452 RPS15AP40-201ENST00000419621 391 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP13P45452 SNRPEP7-201ENST00000438350 220 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC007677.1-201ENST00000445757 515 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC002381.1-201ENST00000447049 280 ntBASIC3.95□□□□□ -1.78
MMP13P45452 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP13P45452 MTND1P12-201ENST00000455231 147 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC099563.1-201ENST00000456086 418 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC026410.2-201ENST00000460281 156 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC087385.1-201ENST00000475062 312 ntBASIC3.95□□□□□ -1.78
MMP13P45452 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MMP13P45452 TRBV12-2-201ENST00000489763 344 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP13P45452 MTCO3P9-201ENST00000506989 781 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC018797.3-201ENST00000513388 1241 ntBASIC3.95□□□□□ -1.78
MMP13P45452 RNU6-1281P-201ENST00000516223 105 ntBASIC3.95□□□□□ -1.78
MMP13P45452 RNU6-1220P-201ENST00000517126 108 ntBASIC3.95□□□□□ -1.78
MMP13P45452 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP13P45452 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms