Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP6P35125 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.21□□□□□ -1.9
USP6P35125 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
USP6P35125 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP6P35125 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
USP6P35125 SNORA51.6-201ENST00000384151 125 ntBASIC3.2□□□□□ -1.9
USP6P35125 AL161449.1-201ENST00000414531 1199 ntBASIC3.2□□□□□ -1.9
USP6P35125 SDCBPP3-201ENST00000419629 891 ntBASIC3.2□□□□□ -1.9
USP6P35125 AL035410.1-201ENST00000427409 427 ntBASIC3.2□□□□□ -1.9
USP6P35125 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.2□□□□□ -1.9
USP6P35125 USP9YP22-201ENST00000438971 294 ntBASIC3.2□□□□□ -1.9
USP6P35125 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.2□□□□□ -1.9
USP6P35125 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
USP6P35125 TRBV26-201ENST00000456572 344 ntBASIC3.2□□□□□ -1.9
USP6P35125 RPL9P6-201ENST00000492764 598 ntBASIC3.2□□□□□ -1.9
USP6P35125 RPL23AP49-201ENST00000492925 468 ntBASIC3.2□□□□□ -1.9
USP6P35125 AL024509.2-201ENST00000493462 493 ntBASIC3.2□□□□□ -1.9
USP6P35125 GTF2IP9-201ENST00000502460 301 ntBASIC3.2□□□□□ -1.9
USP6P35125 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.2□□□□□ -1.9
USP6P35125 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.2□□□□□ -1.9
USP6P35125 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.2□□□□□ -1.9
USP6P35125 SULT1C2P1-202ENST00000562418 459 ntBASIC3.2□□□□□ -1.9
USP6P35125 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.2□□□□□ -1.9
USP6P35125 AC107954.1-201ENST00000565906 727 ntBASIC3.2□□□□□ -1.9
USP6P35125 AC138915.2-201ENST00000569776 97 ntBASIC3.2□□□□□ -1.9
USP6P35125 MTCO2P2-201ENST00000591258 225 ntBASIC3.2□□□□□ -1.9
USP6P35125 AC113368.1-201ENST00000603736 382 ntBASIC3.2□□□□□ -1.9
USP6P35125 AC068313.1-201ENST00000604028 1008 ntBASIC3.2□□□□□ -1.9
USP6P35125 RNU4-5P-201ENST00000607255 135 ntBASIC3.2□□□□□ -1.9
USP6P35125 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.2□□□□□ -1.9
USP6P35125 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.2□□□□□ -1.9
USP6P35125 AC024257.5-201ENST00000612739 531 ntBASIC3.2□□□□□ -1.9
USP6P35125 AC090116.1-201ENST00000615679 446 ntBASIC3.2□□□□□ -1.9
USP6P35125 AC090772.4-201ENST00000623599 362 ntBASIC3.2□□□□□ -1.9
USP6P35125 OR4G3P-201ENST00000633500 913 ntBASIC3.2□□□□□ -1.9
USP6P35125 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP6P35125 ZNF734P-201ENST00000419494 1534 ntBASIC3.2□□□□□ -1.9
USP6P35125 OR4G2P-202ENST00000641004 1759 ntBASIC3.2□□□□□ -1.9
USP6P35125 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP6P35125 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.19□□□□□ -1.9
USP6P35125 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP6P35125 RNU6-263P-201ENST00000363811 107 ntBASIC3.19□□□□□ -1.9
USP6P35125 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP6P35125 Y_RNA.408-201ENST00000383987 102 ntBASIC3.19□□□□□ -1.9
USP6P35125 SNORA41-201ENST00000384675 132 ntBASIC3.19□□□□□ -1.9
USP6P35125 AL136310.1-201ENST00000404926 654 ntBASIC3.19□□□□□ -1.9
USP6P35125 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.19□□□□□ -1.9
USP6P35125 RNU4-22P-201ENST00000411058 166 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC244098.2-201ENST00000422068 99 ntBASIC3.19□□□□□ -1.9
USP6P35125 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP6P35125 AL589880.1-201ENST00000448271 287 ntBASIC3.19□□□□□ -1.9
USP6P35125 PNPLA4P1-201ENST00000458328 305 ntBASIC3.19□□□□□ -1.9
USP6P35125 OR4G11P-201ENST00000492842 939 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.19□□□□□ -1.9
USP6P35125 AC008716.1-201ENST00000511084 513 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.19□□□□□ -1.9
USP6P35125 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.19□□□□□ -1.9
USP6P35125 RNU6-1261P-201ENST00000517194 104 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.19□□□□□ -1.9
USP6P35125 AP001189.2-201ENST00000527320 189 ntBASIC3.19□□□□□ -1.9
USP6P35125 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.19□□□□□ -1.9
USP6P35125 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.19□□□□□ -1.9
USP6P35125 AC106754.1-201ENST00000562632 1513 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.19□□□□□ -1.9
USP6P35125 BNIP3P40-201ENST00000596017 556 ntBASIC3.19□□□□□ -1.9
USP6P35125 BNIP3P8-201ENST00000597863 560 ntBASIC3.19□□□□□ -1.9
USP6P35125 RPP40P2-201ENST00000603596 712 ntBASIC3.19□□□□□ -1.9
USP6P35125 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP6P35125 AC073348.1-201ENST00000623002 331 ntBASIC3.19□□□□□ -1.9
USP6P35125 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP6P35125 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.19□□□□□ -1.9
USP6P35125 MKKS-204ENST00000639674 192 ntBASIC3.19□□□□□ -1.9
USP6P35125 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.19□□□□□ -1.9
USP6P35125 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP6P35125 AC004925.1-201ENST00000624256 2706 ntBASIC3.19□□□□□ -1.9
USP6P35125 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
USP6P35125 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP6P35125 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP6P35125 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.19□□□□□ -1.9
USP6P35125 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP6P35125 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
USP6P35125 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP6P35125 RNU6-76P-201ENST00000384060 104 ntBASIC3.19□□□□□ -1.9
USP6P35125 RNU6-584P-201ENST00000410350 95 ntBASIC3.19□□□□□ -1.9
USP6P35125 RNU2-28P-201ENST00000410457 189 ntBASIC3.19□□□□□ -1.9
USP6P35125 RNU4-78P-201ENST00000410940 126 ntBASIC3.19□□□□□ -1.9
USP6P35125 MTCYBP24-201ENST00000420387 1106 ntBASIC3.19□□□□□ -1.9
USP6P35125 MRPS36P1-201ENST00000421291 307 ntBASIC3.19□□□□□ -1.9
USP6P35125 MTCO1P48-201ENST00000448024 1096 ntBASIC3.19□□□□□ -1.9
USP6P35125 PABPC1P3-201ENST00000469174 459 ntBASIC3.19□□□□□ -1.9
USP6P35125 RPL9P33-201ENST00000484311 566 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC134050.1-201ENST00000495088 933 ntBASIC3.19□□□□□ -1.9
USP6P35125 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.19□□□□□ -1.9
USP6P35125 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.19□□□□□ -1.9
USP6P35125 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.19□□□□□ -1.9
USP6P35125 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.19□□□□□ -1.9
USP6P35125 AC026464.5-201ENST00000562497 722 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP6P35125 AC025281.1-201ENST00000567026 265 ntBASIC3.19□□□□□ -1.9
USP6P35125 AC006270.2-201ENST00000578523 652 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms