Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.23□□□□□ -1.73
SLC6A4P31645 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SLC6A4P31645 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SLC6A4P31645 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SLC6A4P31645 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SLC6A4P31645 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC6A4P31645 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 RNU5E-8P-201ENST00000363502 116 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 Y_RNA.279-201ENST00000364763 95 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 RNU4-48P-201ENST00000365559 182 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 MIR153-1-201ENST00000384914 90 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 MIR558-201ENST00000384920 94 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 MIR1-2-201ENST00000384961 85 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 MT-TD-201ENST00000387419 68 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 RNU6-754P-201ENST00000391166 107 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 OR51A5P-201ENST00000415429 942 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AL391219.1-201ENST00000422570 483 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AL451062.2-201ENST00000427515 271 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC6A4P31645 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC6A4P31645 AC016696.1-201ENST00000446949 318 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AC010655.1-201ENST00000449336 292 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 ELOCP23-201ENST00000452014 332 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AC234775.1-201ENST00000454247 670 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC6A4P31645 RPS26P28-201ENST00000470806 348 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 RPL23AP2-201ENST00000471227 466 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AC068305.1-201ENST00000497406 726 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 HSPD1P15-201ENST00000505573 1122 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 PCBP2P3-201ENST00000509726 843 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 SNORD27.1-201ENST00000516319 72 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 OR8R1P-201ENST00000543943 764 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AC128657.1-201ENST00000549459 145 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC6A4P31645 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 RPL23AP87-202ENST00000573039 466 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 MIR5684-201ENST00000585074 65 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 AC009994.1-201ENST00000606889 253 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AL158211.4-201ENST00000606988 584 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 TUG1_1.1-201ENST00000610654 145 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC6A4P31645 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC6A4P31645 LINC00901.1-201ENST00000617252 152 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC6A4P31645 AC024940.5-201ENST00000622889 474 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SLC6A4P31645 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SLC6A4P31645 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC6A4P31645 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC6A4P31645 Z82217.1-201ENST00000625157 8149 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SLC6A4P31645 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC6A4P31645 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 AC074029.4-201ENST00000624796 1859 ntBASIC4.22□□□□□ -1.73
SLC6A4P31645 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC6A4P31645 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.21□□□□□ -1.73
SLC6A4P31645 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SLC6A4P31645 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A4P31645 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A4P31645 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC6A4P31645 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A4P31645 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SLC6A4P31645 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A4P31645 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A4P31645 MIR448-201ENST00000362131 111 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 RNU6-511P-201ENST00000363496 107 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 RNU6-637P-201ENST00000384050 107 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 RNU6-837P-201ENST00000391056 108 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC068050.1-201ENST00000394891 380 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A4P31645 RPL32P23-201ENST00000397237 405 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 HSPD1P16-201ENST00000402302 394 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 RNU2-47P-201ENST00000410649 186 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 RNU4-6P-201ENST00000410804 122 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 OR9R1P-201ENST00000412200 877 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A4P31645 AL137014.1-201ENST00000420490 1226 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC6A4P31645 ATP5JP1-201ENST00000431631 322 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A4P31645 TBCAP1-201ENST00000436520 327 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC069285.2-201ENST00000440210 275 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC6A4P31645 UBE2V1P7-201ENST00000446395 340 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC6A4P31645 snoU13.3-201ENST00000459441 104 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 RPS20P20-201ENST00000460498 340 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC091951.2-201ENST00000500762 203 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC020893.1-201ENST00000502452 580 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC114786.4-201ENST00000508771 728 ntBASIC4.21□□□□□ -1.74
SLC6A4P31645 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A4P31645 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms