Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC002542.1-201ENST00000440683 193 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 AC007000.2-201ENST00000442564 487 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 AC092757.1-201ENST00000467293 467 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.62□□□□□ -1.99
CASQ1P31415 AC084024.2-201ENST00000503480 791 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.62□□□□□ -1.99
CASQ1P31415 TTC39CP1-201ENST00000512513 755 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CASQ1P31415 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.62□□□□□ -1.99
CASQ1P31415 AC079600.2-201ENST00000550076 130 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 DUXAP10-204ENST00000612052 616 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CASQ1P31415 AC080128.1-201ENST00000474389 1917 ntBASIC2.62□□□□□ -1.99
CASQ1P31415 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CASQ1P31415 AC131280.1-202ENST00000624067 4211 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.61□□□□□ -1.99
CASQ1P31415 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.61□□□□□ -1.99
CASQ1P31415 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.61□□□□□ -1.99
CASQ1P31415 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CASQ1P31415 MIRLET7G-201ENST00000362280 84 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CASQ1P31415 RNVU1-14-201ENST00000384770 164 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 UBA52P6-201ENST00000399822 382 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 AL139098.1-201ENST00000407291 389 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CASQ1P31415 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.61□□□□□ -1.99
CASQ1P31415 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.61□□□□□ -1.99
CASQ1P31415 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.61□□□□□ -1.99
CASQ1P31415 CYCSP32-201ENST00000440548 321 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 MTATP6P7-201ENST00000453315 681 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.61□□□□□ -1.99
CASQ1P31415 AC108734.3-201ENST00000481241 1165 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 AC114786.4-201ENST00000508771 728 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 AC114797.1-201ENST00000514003 728 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 AP005902.1-201ENST00000521358 186 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.61□□□□□ -1.99
CASQ1P31415 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.61□□□□□ -1.99
CASQ1P31415 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.61□□□□□ -1.99
CASQ1P31415 AC061975.8-201ENST00000587058 721 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 AC021749.1-201ENST00000604322 607 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 YPEL5P2-201ENST00000605553 359 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.61□□□□□ -1.99
CASQ1P31415 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.61□□□□□ -1.99
CASQ1P31415 AC073346.2-201ENST00000624724 2058 ntBASIC2.61□□□□□ -1.99
CASQ1P31415 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CASQ1P31415 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.6□□□□□ -1.99
CASQ1P31415 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CASQ1P31415 CKAP2P1-201ENST00000555477 2049 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 RNU6-796P-201ENST00000391086 107 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 U3.40-201ENST00000408706 208 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 GTF2IP9-201ENST00000502460 301 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.6□□□□□ -1.99
CASQ1P31415 AC023141.11-201ENST00000508864 202 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 AC109471.1-201ENST00000511631 612 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 SNORA48.10-201ENST00000516965 160 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.6□□□□□ -1.99
CASQ1P31415 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.6□□□□□ -1.99
CASQ1P31415 AC107214.2-201ENST00000608204 634 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.6□□□□□ -1.99
CASQ1P31415 AC007785.2-201ENST00000598627 1916 ntBASIC2.6□□□□□ -1.99
CASQ1P31415 ZNF658B-202ENST00000615961 3375 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CASQ1P31415 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.59□□□□□ -1.99
CASQ1P31415 MIR449B-201ENST00000384995 97 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 MIR9-1-201ENST00000385198 89 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 RNU6-220P-201ENST00000390919 107 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 AP002784.2-201ENST00000397300 549 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 HMGB3P2-201ENST00000411913 584 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.59□□□□□ -1.99
CASQ1P31415 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.59□□□□□ -1.99
CASQ1P31415 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.59□□□□□ -1.99
CASQ1P31415 AL049734.2-201ENST00000441066 616 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 EEF1B2P7-201ENST00000451177 676 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 HSPE1P6-201ENST00000479457 291 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 RPS27P21-201ENST00000486977 252 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 COX7A2P2-201ENST00000505291 250 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 AC048346.1-201ENST00000510247 144 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 RNU5F-8P-201ENST00000515941 111 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 AP002748.2-201ENST00000528671 348 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 CYCSP26-201ENST00000534107 320 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 CCNG2P1-201ENST00000549521 1000 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 AC124947.2-202ENST00000552735 133 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 CKS1BP1-201ENST00000555221 240 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 NIFKP8-201ENST00000560500 874 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.59□□□□□ -1.99
CASQ1P31415 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.59□□□□□ -1.99
CASQ1P31415 RMST_10.1-201ENST00000616309 154 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 AL031601.2-202ENST00000622650 282 ntBASIC2.59□□□□□ -1.99
CASQ1P31415 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CASQ1P31415 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.59□□□□□ -2
CASQ1P31415 FAM133CP-201ENST00000332869 704 ntBASIC2.58□□□□□ -2
CASQ1P31415 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CASQ1P31415 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CASQ1P31415 RNU6-301P-201ENST00000384277 107 ntBASIC2.58□□□□□ -2
CASQ1P31415 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.58□□□□□ -2
CASQ1P31415 HMGN2P38-201ENST00000423806 265 ntBASIC2.58□□□□□ -2
CASQ1P31415 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms