Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC13P31276 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC13P31276 AC026333.2-201ENST00000542164 106 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC13P31276 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.64□□□□□ -1.83
HOXC13P31276 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC13P31276 MIR3921-201ENST00000577308 85 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 MIR4738-201ENST00000579134 87 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 MIR4801-201ENST00000582704 82 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 AC022146.1-201ENST00000595307 847 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 TUG1_1.1-201ENST00000610654 145 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC116165.2-201ENST00000616705 206 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC13P31276 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC13P31276 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC13P31276 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC13P31276 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
HOXC13P31276 ELL2P3-201ENST00000457883 1602 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HOXC13P31276 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC005539.1-201ENST00000443768 1479 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC13P31276 RNU6-882P-201ENST00000391025 103 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 RAP1BP3-201ENST00000407180 549 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 RN7SKP111-201ENST00000410349 271 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC084290.1-201ENST00000434995 374 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC13P31276 AL671855.1-201ENST00000446875 1203 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 ARPC3P5-201ENST00000448802 534 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC13P31276 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC091179.1-201ENST00000461606 579 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC13P31276 RPS3AP22-201ENST00000488297 769 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC13P31276 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC090136.1-201ENST00000520009 240 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 AC093331.1-201ENST00000521474 169 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXC13P31276 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC13P31276 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXC13P31276 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC13P31276 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC011260.1-201ENST00000578420 472 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 MTATP6P3-201ENST00000581686 676 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC13P31276 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 OR2AS2P-201ENST00000606902 342 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC104073.3-201ENST00000610942 955 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC022149.2-201ENST00000621061 203 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 AP003400.5-201ENST00000624827 617 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 SCARNA15.3-201ENST00000626315 122 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 SCARNA4.1-201ENST00000628597 123 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC099654.13-201ENST00000639774 207 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC006504.1-201ENST00000562493 3666 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC13P31276 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC011460.1-201ENST00000636268 1834 ntBASIC3.63□□□□□ -1.83
HOXC13P31276 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HOXC13P31276 AC087359.1-201ENST00000508335 1740 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC13P31276 RNU6-28P-201ENST00000362378 107 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 RNU6-799P-201ENST00000363567 107 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 RNU6-621P-201ENST00000364752 109 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 MIR493-201ENST00000385254 89 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HOXC13P31276 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXC13P31276 MRPL50P2-201ENST00000416821 482 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.62□□□□□ -1.83
HOXC13P31276 USP9YP26-201ENST00000421008 661 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC13P31276 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC13P31276 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC13P31276 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC13P31276 SDCBPP1-201ENST00000440192 890 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AL031667.1-201ENST00000440222 725 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 UBE2D3P4-201ENST00000441973 436 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms