Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN6P29350 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN6P29350 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN6P29350 BNIP3P40-201ENST00000596017 556 ntBASIC2.99□□□□□ -1.93
PTPN6P29350 RPL23AP78-201ENST00000599928 470 ntBASIC2.99□□□□□ -1.93
PTPN6P29350 AP001429.1-201ENST00000602568 530 ntBASIC2.99□□□□□ -1.93
PTPN6P29350 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN6P29350 HSPE1P7-201ENST00000604681 321 ntBASIC2.99□□□□□ -1.93
PTPN6P29350 AL158211.4-201ENST00000606988 584 ntBASIC2.99□□□□□ -1.93
PTPN6P29350 AP000254.1-201ENST00000609934 520 ntBASIC2.99□□□□□ -1.93
PTPN6P29350 AC027309.3-201ENST00000623419 351 ntBASIC2.99□□□□□ -1.93
PTPN6P29350 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PTPN6P29350 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN6P29350 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN6P29350 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN6P29350 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PTPN6P29350 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PTPN6P29350 RNU6-1197P-201ENST00000391183 107 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 Z92545.1-201ENST00000411782 234 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 ELOCP9-201ENST00000418624 239 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 MTCO2P20-201ENST00000437339 673 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 CYCSP32-201ENST00000440548 321 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN6P29350 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN6P29350 MTND1P31-201ENST00000449206 961 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 USP9YP10-201ENST00000454868 628 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 RPL30P9-201ENST00000465586 330 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AL049714.1-201ENST00000466686 347 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN6P29350 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.98□□□□□ -1.93
PTPN6P29350 AC109464.2-201ENST00000510242 943 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN6P29350 AC024589.1-201ENST00000512207 263 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN6P29350 RN7SKP57-201ENST00000517248 293 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.98□□□□□ -1.93
PTPN6P29350 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN6P29350 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
PTPN6P29350 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN6P29350 MIR5680-201ENST00000577577 84 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.98□□□□□ -1.93
PTPN6P29350 AL353997.4-201ENST00000586196 166 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AC105224.1-201ENST00000587055 421 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AL158042.1-201ENST00000605338 460 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN6P29350 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN6P29350 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AC008443.7-201ENST00000622195 246 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 AC090617.7-201ENST00000623952 126 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
PTPN6P29350 AC005832.2-201ENST00000538921 1430 ntBASIC2.98□□□□□ -1.93
PTPN6P29350 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
PTPN6P29350 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN6P29350 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN6P29350 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PTPN6P29350 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN6P29350 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN6P29350 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PTPN6P29350 RNU5A-1-201ENST00000362698 116 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 RNU6-289P-201ENST00000364093 107 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 SNORA38.1-201ENST00000364172 131 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PTPN6P29350 RNU6-1207P-201ENST00000384343 107 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 AL356421.1-201ENST00000403255 413 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 MIR1289-1-201ENST00000408836 144 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN6P29350 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN6P29350 AL590383.1-201ENST00000428602 75 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 AL356867.1-201ENST00000429623 299 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 OR4K11P-201ENST00000431829 904 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 RPL26P6-201ENST00000440913 438 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 FGF7P5-201ENST00000441829 291 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 PAXBP1P1-201ENST00000449315 447 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN6P29350 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 RPL31P60-201ENST00000478450 367 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 RPL30P5-201ENST00000494923 336 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN6P29350 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.97□□□□□ -1.93
PTPN6P29350 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN6P29350 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.97□□□□□ -1.93
PTPN6P29350 AC125611.2-201ENST00000551907 647 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.97□□□□□ -1.93
PTPN6P29350 AC034268.2-201ENST00000571784 482 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN6P29350 AC091057.2-201ENST00000602594 792 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 YPEL5P2-201ENST00000605553 359 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 AC107294.3-201ENST00000609211 526 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 MIR6130-201ENST00000619419 109 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 AL078595.3-201ENST00000623815 1166 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 AC079228.1-201ENST00000624774 1049 ntBASIC2.97□□□□□ -1.93
PTPN6P29350 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN6P29350 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN6P29350 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN6P29350 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
PTPN6P29350 AC011477.1-204ENST00000623416 1325 ntBASIC2.96□□□□□ -1.93
PTPN6P29350 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms