Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL353691.1-201ENST00000451332 387 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 RPL27AP5-201ENST00000469428 449 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC104563.1-201ENST00000476147 376 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC109925.1-201ENST00000478069 331 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC022483.1-201ENST00000514020 567 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 OR5AK1P-201ENST00000524837 922 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 DEFB131D-201ENST00000526803 184 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PTPN4P29074 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN4P29074 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPN4P29074 NBEAP1-201ENST00000554452 979 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC013444.2-201ENST00000603317 787 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC011451.2-201ENST00000604303 598 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC245297.2-201ENST00000610119 565 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC092106.3-201ENST00000611308 722 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AL162274.2-201ENST00000614406 332 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC011330.2-201ENST00000621680 635 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AL445264.1-201ENST00000621719 171 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN4P29074 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PTPN4P29074 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
PTPN4P29074 AC092435.3-201ENST00000565538 3654 ntBASIC3.11□□□□□ -1.91
PTPN4P29074 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PTPN4P29074 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN4P29074 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PTPN4P29074 DEFB108F-201ENST00000344638 222 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 RNU6-799P-201ENST00000363567 107 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 UBA52P6-201ENST00000399822 382 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 RPL7P46-201ENST00000425129 740 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN4P29074 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPN4P29074 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN4P29074 MTCO2P20-201ENST00000437339 673 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 FGF7P5-201ENST00000441829 291 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN4P29074 MTND1P9-201ENST00000453775 944 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC234775.1-201ENST00000454247 670 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC092798.1-201ENST00000458542 409 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 S100A11P2-201ENST00000467589 312 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN4P29074 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPN4P29074 AC091951.3-201ENST00000504093 246 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN4P29074 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.1□□□□□ -1.91
PTPN4P29074 AL359273.1-201ENST00000510918 627 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PTPN4P29074 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.1□□□□□ -1.91
PTPN4P29074 DEFB108D-201ENST00000527787 222 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN4P29074 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN4P29074 MIR3921-201ENST00000577308 85 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC011260.1-201ENST00000578420 472 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC079089.3-201ENST00000603094 673 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC006270.3-201ENST00000605967 1036 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC107952.2-201ENST00000606048 486 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC080013.3-201ENST00000606839 578 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC131235.4-201ENST00000609288 620 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AL355816.2-201ENST00000610049 647 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN4P29074 SCARNA15.3-201ENST00000626315 122 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 SCARNA4.1-201ENST00000628597 123 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 AC008993.2-201ENST00000631744 806 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 LRRC77P-213ENST00000637727 880 ntBASIC3.1□□□□□ -1.91
PTPN4P29074 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.1□□□□□ -1.91
PTPN4P29074 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN4P29074 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
PTPN4P29074 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PTPN4P29074 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN4P29074 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN4P29074 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN4P29074 AL161781.1-201ENST00000354277 403 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN4P29074 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PTPN4P29074 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 RNU6-83P-201ENST00000384568 112 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 DHFRP6-201ENST00000401776 268 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 RNU2-43P-201ENST00000410306 190 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 RPL22P18-201ENST00000417197 377 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 HMGB1P49-201ENST00000418882 569 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 AL139421.1-201ENST00000423010 169 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 AL953862.1-201ENST00000423016 168 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN4P29074 YWHAZP7-201ENST00000436906 631 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN4P29074 AL592447.1-201ENST00000447592 540 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 SNORA59A-201ENST00000459326 152 ntBASIC3.09□□□□□ -1.91
PTPN4P29074 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.09□□□□□ -1.91
PTPN4P29074 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms