Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DMBP28068 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
HLA-DMBP28068 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DMBP28068 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
HLA-DMBP28068 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HLA-DMBP28068 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DMBP28068 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DMBP28068 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DMBP28068 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 AL359693.1-201ENST00000614959 2407 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 DEFB108F-201ENST00000344638 222 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DMBP28068 RNU6-883P-201ENST00000384597 107 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AL356057.1-202ENST00000402263 756 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 RNU6-193P-201ENST00000410977 107 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 RNA5SP508-201ENST00000411327 119 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC007064.1-201ENST00000412238 351 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 Z75741.2-201ENST00000417272 1167 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC009414.1-201ENST00000427200 443 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC090774.1-201ENST00000435925 246 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AL714022.1-201ENST00000439897 151 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC002542.1-201ENST00000440683 193 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 RNFT1P2-201ENST00000443064 757 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 RPL23AP45-201ENST00000476406 468 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC116337.2-201ENST00000477662 156 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 OR52A4P-202ENST00000481634 799 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 RPL23AP70-201ENST00000483361 460 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 HMGB3P3-201ENST00000510526 400 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 RNA5SP471-201ENST00000516971 106 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 DEFB108D-201ENST00000527787 222 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AP001646.1-201ENST00000527936 915 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC121758.2-201ENST00000553271 193 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 RPL23AP84-201ENST00000571193 464 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 MIR3921-201ENST00000577308 85 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC103810.1-201ENST00000579873 453 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC079791.1-201ENST00000605356 973 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC097504.2-201ENST00000608088 454 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC034102.8-201ENST00000615146 484 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC025588.4-201ENST00000615802 908 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC132825.7-201ENST00000638744 335 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.85□□□□□ -2.11
HLA-DMBP28068 Z82209.1-201ENST00000422141 2135 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 AC008432.1-201ENST00000615912 1320 ntBASIC1.85□□□□□ -2.11
HLA-DMBP28068 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DMBP28068 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DMBP28068 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DMBP28068 RNA5SP456-201ENST00000364002 114 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 RNU6-270P-201ENST00000364131 105 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 TAS2R15P-201ENST00000390674 928 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AL445529.1-201ENST00000398713 389 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 FCF1P1-201ENST00000432690 571 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC092573.2-201ENST00000434546 243 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AL513328.1-201ENST00000446460 224 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 WASF1P1-201ENST00000447560 1131 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AL050341.1-201ENST00000447743 313 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC104164.3-201ENST00000467363 1258 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC108729.2-201ENST00000476543 840 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 RBM43P1-201ENST00000476891 1081 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 RPL31P41-201ENST00000477967 372 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 RN7SKP24-201ENST00000515888 284 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 RNU5A-7P-201ENST00000515979 116 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 RNU6-798P-201ENST00000516912 103 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 UBTFL10-201ENST00000528532 562 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC087241.2-201ENST00000535801 324 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 SETP7-201ENST00000552169 453 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 VN1R78P-201ENST00000597393 564 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC013444.2-201ENST00000603317 787 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 AC010149.2-201ENST00000637608 315 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DMBP28068 ZNF658B-202ENST00000615961 3375 ntBASIC1.84□□□□□ -2.11
HLA-DMBP28068 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
HLA-DMBP28068 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms