Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AL355836.1-201ENST00000555951 870 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 MIR5680-201ENST00000577577 84 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC008739.2-201ENST00000597006 317 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC091057.3-201ENST00000602684 733 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AL161756.2-201ENST00000604597 246 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC090186.1-201ENST00000605991 572 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC107294.3-201ENST00000609211 526 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC090617.7-201ENST00000623952 126 ntBASIC3.18□□□□□ -1.9
HLA-DPA1P20036 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DPA1P20036 AC092447.10-201ENST00000620607 1652 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC099654.7-201ENST00000635788 2127 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 DDX10P1-201ENST00000448545 1933 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 SNORA23-201ENST00000365128 182 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 SNORA7.4-201ENST00000384249 137 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 USP9YP10-201ENST00000454868 628 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 RPS20P20-201ENST00000460498 340 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 HMGN1P28-201ENST00000521340 364 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 RNU4-5P-201ENST00000607255 135 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AL442067.2-201ENST00000614033 363 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AL109620.1-201ENST00000618738 1197 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC006386.1-201ENST00000619436 415 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC022306.3-201ENST00000619930 550 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC068880.5-201ENST00000624331 290 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 AC019226.1-201ENST00000625666 515 ntBASIC3.17□□□□□ -1.9
HLA-DPA1P20036 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC092648.1-201ENST00000425870 423 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 RPL23AP83-201ENST00000434984 473 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 UBE2V1P13-201ENST00000436983 439 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC108734.1-201ENST00000439549 399 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 RPS12P18-201ENST00000442381 270 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 LARP1BP2-201ENST00000486594 519 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC026427.2-201ENST00000506228 536 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC010587.2-201ENST00000511727 448 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC090888.1-201ENST00000561335 1141 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC068135.2-201ENST00000569293 1028 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC005951.2-201ENST00000576282 495 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC020895.1-201ENST00000595362 272 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AL391834.2-201ENST00000609982 546 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC004852.3-201ENST00000614131 326 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC013476.2-201ENST00000614456 459 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC079228.1-201ENST00000624774 1049 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC010608.3-201ENST00000625048 527 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 MIR3651-201ENST00000630427 90 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
HLA-DPA1P20036 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HLA-DPA1P20036 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.9
HLA-DPA1P20036 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.15□□□□□ -1.9
HLA-DPA1P20036 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DPA1P20036 RNU4-92P-201ENST00000363783 136 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms