Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC008897.1-201ENST00000494006 347 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 RNU6-1095P-201ENST00000516148 108 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 MYL12AP1-201ENST00000518490 515 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.57□□□□□ -1.68
COL6A2P12110 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.57□□□□□ -1.68
COL6A2P12110 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.57□□□□□ -1.68
COL6A2P12110 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.57□□□□□ -1.68
COL6A2P12110 RN7SL652P-201ENST00000577769 300 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.57□□□□□ -1.68
COL6A2P12110 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.57□□□□□ -1.68
COL6A2P12110 BNIP3P25-201ENST00000596023 559 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.57□□□□□ -1.68
COL6A2P12110 AL592436.1-201ENST00000605135 558 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 uc_338.15-201ENST00000615470 191 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 AL357559.1-201ENST00000622228 274 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 AC091905.2-201ENST00000623143 306 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.57□□□□□ -1.68
COL6A2P12110 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.57□□□□□ -1.68
COL6A2P12110 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.57□□□□□ -1.68
COL6A2P12110 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.57□□□□□ -1.68
COL6A2P12110 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
COL6A2P12110 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.57□□□□□ -1.68
COL6A2P12110 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.57□□□□□ -1.68
COL6A2P12110 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.57□□□□□ -1.68
COL6A2P12110 MAPK10-263ENST00000641052 4307 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
COL6A2P12110 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL6A2P12110 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.56□□□□□ -1.68
COL6A2P12110 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL6A2P12110 Y_RNA.339-201ENST00000365325 102 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 Y_RNA.378-201ENST00000365652 113 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.56□□□□□ -1.68
COL6A2P12110 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 AL645733.1-201ENST00000402250 217 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 AL353729.1-201ENST00000425044 720 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 RPL7P46-201ENST00000425129 740 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 CALM2P2-201ENST00000428512 440 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.56□□□□□ -1.68
COL6A2P12110 NRBF2P3-201ENST00000432731 865 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 KCTD9P3-201ENST00000434597 1169 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 PSMD10P3-201ENST00000437000 448 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 RPL12P3-201ENST00000440080 396 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 MTCO3P45-201ENST00000443036 613 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 PRPS1P1-201ENST00000445305 876 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 GAPDHP27-201ENST00000447427 1020 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 CCDC34P1-201ENST00000507441 517 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 AC104806.1-201ENST00000508720 308 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 SNORA25.17-201ENST00000517184 124 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 AP001804.3-201ENST00000525146 880 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 AP005597.4-201ENST00000526762 229 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 AC100770.1-201ENST00000532310 322 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL6A2P12110 POLR3GP2-201ENST00000588366 668 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 AC103710.3-201ENST00000608157 948 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL6A2P12110 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL6A2P12110 INTS6P1-201ENST00000504674 2530 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
COL6A2P12110 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL6A2P12110 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL6A2P12110 AP001350.1-201ENST00000601906 1524 ntBASIC4.56□□□□□ -1.68
COL6A2P12110 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.56□□□□□ -1.68
COL6A2P12110 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.55□□□□□ -1.68
COL6A2P12110 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL6A2P12110 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
COL6A2P12110 AC010300.1-201ENST00000600671 5134 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 TPTE2P4-201ENST00000258589 1605 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.55□□□□□ -1.68
COL6A2P12110 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL6A2P12110 RNU6-1287P-201ENST00000362914 107 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 RNA5SP513-201ENST00000364648 118 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 RNA5SP22-201ENST00000365393 109 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.55□□□□□ -1.68
COL6A2P12110 RNU6-1060P-201ENST00000384664 107 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AC140479.3-201ENST00000418944 1126 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AL590762.4-201ENST00000425885 253 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 GTF2IP13-201ENST00000438487 386 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 NDUFS5P3-201ENST00000450668 321 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.55□□□□□ -1.68
COL6A2P12110 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.55□□□□□ -1.68
COL6A2P12110 NDUFB5P1-201ENST00000508134 564 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.55□□□□□ -1.68
COL6A2P12110 AC108078.2-201ENST00000510750 236 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.55□□□□□ -1.68
COL6A2P12110 RNU6-685P-201ENST00000517088 95 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.55□□□□□ -1.68
COL6A2P12110 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.55□□□□□ -1.68
COL6A2P12110 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms