Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
FREM3P0C091 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
FREM3P0C091 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.73□□□□□ -2.13
FREM3P0C091 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
FREM3P0C091 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
FREM3P0C091 MIR421-201ENST00000365696 85 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 RNU6-152P-201ENST00000384037 107 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 VTA1P1-201ENST00000414044 866 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 SPA17P1-201ENST00000416656 452 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 MORF4L1P6-201ENST00000418771 268 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.73□□□□□ -2.13
FREM3P0C091 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.73□□□□□ -2.13
FREM3P0C091 RPS29P20-201ENST00000489592 171 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.73□□□□□ -2.13
FREM3P0C091 ISCA1P3-201ENST00000577104 373 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.73□□□□□ -2.13
FREM3P0C091 VN1R9P-201ENST00000614184 867 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
FREM3P0C091 AC095031.1-201ENST00000623685 672 ntBASIC1.73□□□□□ -2.13
FREM3P0C091 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.73□□□□□ -2.13
FREM3P0C091 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
FREM3P0C091 AL606495.1-201ENST00000422100 813 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.72□□□□□ -2.13
FREM3P0C091 AL590762.3-201ENST00000436372 640 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
FREM3P0C091 RPS15AP7-201ENST00000439294 405 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 MTND2P19-201ENST00000449129 1012 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 OR52A4P-203ENST00000498233 1014 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.72□□□□□ -2.13
FREM3P0C091 RAC1P5-201ENST00000512182 576 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 SNORA31.8-201ENST00000516327 108 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.72□□□□□ -2.13
FREM3P0C091 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.72□□□□□ -2.13
FREM3P0C091 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.72□□□□□ -2.13
FREM3P0C091 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.72□□□□□ -2.13
FREM3P0C091 MED28P6-201ENST00000558776 231 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 MIR4446-201ENST00000578505 67 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 AC091834.1-201ENST00000614543 472 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 AC007275.1-201ENST00000621243 671 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.72□□□□□ -2.13
FREM3P0C091 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.72□□□□□ -2.13
FREM3P0C091 AC010680.1-201ENST00000590024 3590 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.72□□□□□ -2.13
FREM3P0C091 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
FREM3P0C091 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
FREM3P0C091 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.72□□□□□ -2.13
FREM3P0C091 UBBP3-201ENST00000445497 241 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.72□□□□□ -2.13
FREM3P0C091 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 RPL21P39-201ENST00000463605 483 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.72□□□□□ -2.13
FREM3P0C091 MIR4504-201ENST00000577413 92 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.72□□□□□ -2.13
FREM3P0C091 ZNF734P-201ENST00000419494 1534 ntBASIC1.72□□□□□ -2.13
FREM3P0C091 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
FREM3P0C091 RNU6-173P-201ENST00000364215 104 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
FREM3P0C091 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
FREM3P0C091 RNU6-14P-201ENST00000384630 106 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 RPL21P75-201ENST00000396599 483 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 RPL21P28-201ENST00000401418 483 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AL592114.1-201ENST00000403842 483 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 HMGB3P2-201ENST00000411913 584 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.71□□□□□ -2.14
FREM3P0C091 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
FREM3P0C091 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.71□□□□□ -2.14
FREM3P0C091 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.71□□□□□ -2.14
FREM3P0C091 AL645638.1-201ENST00000440519 361 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AL021397.1-201ENST00000451806 248 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AC011979.1-201ENST00000472300 483 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AP000852.1-201ENST00000472460 573 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AC017007.3-201ENST00000479865 435 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 RPL21P93-201ENST00000480465 489 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AC233702.1-201ENST00000482905 502 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AC093591.1-201ENST00000491435 481 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 RPL21P16-201ENST00000495531 483 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 RPL21P131-201ENST00000497298 483 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 CIR1P1-201ENST00000524055 1133 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 NOP56P3-201ENST00000549457 385 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.71□□□□□ -2.14
FREM3P0C091 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.71□□□□□ -2.14
FREM3P0C091 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.71□□□□□ -2.14
FREM3P0C091 AC245036.5-201ENST00000596330 847 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AC008739.2-201ENST00000597006 317 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AC092474.3-201ENST00000603022 568 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 AC012150.2-201ENST00000621300 544 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 SGO1P2-201ENST00000429458 1589 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.71□□□□□ -2.14
FREM3P0C091 AC092881.1-201ENST00000638218 2733 ntBASIC1.71□□□□□ -2.14
FREM3P0C091 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
FREM3P0C091 AC080128.1-201ENST00000474389 1917 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AL356292.1-201ENST00000283110 373 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 552.5 ms