Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
IGKV3-11P04433 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.53□□□□□ -2
IGKV3-11P04433 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.53□□□□□ -2
IGKV3-11P04433 Z99496.1-201ENST00000469424 1477 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.53□□□□□ -2
IGKV3-11P04433 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
IGKV3-11P04433 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.53□□□□□ -2
IGKV3-11P04433 AL512646.1-201ENST00000269395 1077 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.53□□□□□ -2
IGKV3-11P04433 U3.26-201ENST00000391236 204 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.53□□□□□ -2
IGKV3-11P04433 AL159169.1-201ENST00000421119 127 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 CYCSP46-201ENST00000423569 204 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 C8orf59P1-201ENST00000429930 303 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC010881.1-201ENST00000433830 235 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 USP9YP7-201ENST00000436723 430 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 MTCYBP39-201ENST00000437562 491 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 USP9YP29-201ENST00000445112 563 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 MTCO2P25-201ENST00000447065 681 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.53□□□□□ -2
IGKV3-11P04433 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.53□□□□□ -2
IGKV3-11P04433 USP9YP32-201ENST00000452432 430 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 AP001486.1-201ENST00000463339 476 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.53□□□□□ -2
IGKV3-11P04433 VN1R104P-201ENST00000505115 1009 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 SNX5P1-201ENST00000505757 1041 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 HMGB1P28-201ENST00000507778 552 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 NDUFB4P9-201ENST00000511646 388 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.53□□□□□ -2
IGKV3-11P04433 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 AC109445.1-201ENST00000512356 383 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.53□□□□□ -2
IGKV3-11P04433 AC008562.1-201ENST00000521763 330 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.53□□□□□ -2
IGKV3-11P04433 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3-11P04433 SNORD39.3-201ENST00000584451 71 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC006504.3-201ENST00000586818 523 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AF131215.7-201ENST00000602443 707 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC010680.4-201ENST00000605334 543 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC090186.1-201ENST00000605991 572 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC005046.1-201ENST00000608515 625 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AL357080.1-201ENST00000617394 239 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC073968.1-201ENST00000618594 637 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC026585.1-201ENST00000619582 524 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC099842.1-201ENST00000619919 596 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.53□□□□□ -2
IGKV3-11P04433 AL356266.1-201ENST00000623311 483 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC084035.1-201ENST00000634543 607 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 AC090582.1-201ENST00000636321 199 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 TAB3P1-202ENST00000452645 1634 ntBASIC2.53□□□□□ -2
IGKV3-11P04433 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 ZNF37BP-203ENST00000452306 1352 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
IGKV3-11P04433 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
IGKV3-11P04433 RNU6-777P-201ENST00000364265 104 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 RNU6-1293P-201ENST00000384077 107 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 SNORA75-201ENST00000384158 137 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 RPL17P50-201ENST00000396131 546 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL590004.2-201ENST00000404787 371 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 RNU6-272P-201ENST00000411028 104 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL139281.1-201ENST00000422120 335 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 RPL30P3-201ENST00000424262 333 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL513175.1-201ENST00000431492 780 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 AC098826.1-201ENST00000433943 471 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL031663.1-201ENST00000437445 219 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 RPL18AP17-201ENST00000455326 198 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 MTND1P16-201ENST00000465177 898 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AL049873.1-201ENST00000480540 376 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.52□□□□□ -2.01
IGKV3-11P04433 CBX3P3-201ENST00000508108 532 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AC079140.3-201ENST00000511111 550 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AC091965.2-201ENST00000512324 613 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 RNA5SP356-201ENST00000515972 94 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 SNORA70.14-201ENST00000516205 110 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 RNU6-1261P-201ENST00000517194 104 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 COX6CP8-201ENST00000522620 226 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 AC022790.1-201ENST00000522872 204 ntBASIC2.52□□□□□ -2.01
IGKV3-11P04433 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
IGKV3-11P04433 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms