Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AL021407.1-201ENST00000404531 386 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 RN7SKP202-201ENST00000410439 330 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 RNA5SP38-201ENST00000410750 119 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 SSXP9-201ENST00000417503 292 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AL445669.1-201ENST00000426743 755 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.03□□□□□ -1.92
MT-ND1P03886 HSPE1P28-201ENST00000443139 211 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 CDC27P1-201ENST00000445384 715 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 RPL21P23-201ENST00000446654 460 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 UQCRHP3-201ENST00000451503 251 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.03□□□□□ -1.92
MT-ND1P03886 RN7SL283P-201ENST00000489055 303 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AC023424.2-201ENST00000493479 777 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 VN1R104P-201ENST00000505115 1009 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AC117522.2-201ENST00000510049 657 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AL356057.1-201ENST00000533798 831 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AC007954.1-201ENST00000554198 494 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AC106785.1-201ENST00000565935 262 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.03□□□□□ -1.92
MT-ND1P03886 ROCK1P1-201ENST00000573767 549 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.03□□□□□ -1.92
MT-ND1P03886 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.03□□□□□ -1.92
MT-ND1P03886 RNU6-88P-201ENST00000606801 100 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AC107214.2-201ENST00000608204 634 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 AC091931.1-201ENST00000623488 728 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.03□□□□□ -1.92
MT-ND1P03886 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.03□□□□□ -1.92
MT-ND1P03886 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
MT-ND1P03886 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MT-ND1P03886 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
MT-ND1P03886 MIR1302-8-201ENST00000408342 128 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 RNU2-43P-201ENST00000410306 190 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 TPMTP3-201ENST00000411928 735 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 RPL36AP36-201ENST00000418616 301 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AC083875.1-201ENST00000419509 405 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC012498.1-201ENST00000424037 437 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL390023.1-201ENST00000428836 262 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 SETP8-201ENST00000435341 628 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 HSPD1P21-201ENST00000436541 245 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.02□□□□□ -1.93
MT-ND1P03886 MTCYBP39-201ENST00000437562 491 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 MTND2P4-201ENST00000445034 1004 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL122001.1-201ENST00000457027 370 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.02□□□□□ -1.93
MT-ND1P03886 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 APOOP4-201ENST00000513530 597 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 SNORA70.16-201ENST00000516390 95 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 OR4T1P-201ENST00000554933 911 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AL133393.1-201ENST00000603277 287 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AC004987.4-201ENST00000603383 338 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.02□□□□□ -1.93
MT-ND1P03886 MTCYBP22-201ENST00000603788 447 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 DUXAP11-201ENST00000603858 526 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL358072.1-201ENST00000604156 575 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 OR2AS2P-201ENST00000606902 342 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AC097468.3-201ENST00000607956 456 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL138880.2-201ENST00000616214 239 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
MT-ND1P03886 AL356266.1-201ENST00000623311 483 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL034408.1-202ENST00000636088 415 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AC244258.1-201ENST00000637553 1071 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 AL356473.1-201ENST00000406203 1408 ntBASIC3.02□□□□□ -1.93
MT-ND1P03886 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
MT-ND1P03886 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.01□□□□□ -1.93
MT-ND1P03886 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MT-ND1P03886 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
MT-ND1P03886 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms