Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC098614.4-201ENST00000607601 462 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC090970.3-201ENST00000612566 866 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL2A1P02458 DCAF13P3-201ENST00000561147 1334 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL2A1P02458 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 RNU6-797P-201ENST00000363101 109 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 RNY3P10-201ENST00000384764 102 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 MIR34A-201ENST00000385130 110 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.35□□□□□ -1.87
COL2A1P02458 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 HMGB3P23-201ENST00000414981 585 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AL513477.1-202ENST00000417061 214 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 AC233981.1-201ENST00000423224 461 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.35□□□□□ -1.87
COL2A1P02458 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 AL590103.1-201ENST00000434488 307 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.35□□□□□ -1.87
COL2A1P02458 ELOCP10-201ENST00000440624 327 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 COX6CP2-201ENST00000444980 225 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 EEF1E1P1-201ENST00000446998 430 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.35□□□□□ -1.87
COL2A1P02458 EPS15P1-201ENST00000448836 336 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 HSPE1P6-201ENST00000479457 291 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC104687.1-201ENST00000485829 412 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 RPS27AP18-201ENST00000515536 459 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 RNU6-1308P-201ENST00000516817 103 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 IGKV2D-23-201ENST00000518179 286 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 OR5AK3P-201ENST00000527486 1297 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 AC007954.1-201ENST00000554198 494 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AL121579.1-201ENST00000555129 305 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 MIR548AB-201ENST00000584917 84 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC005771.1-201ENST00000585581 349 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 ELOCP34-201ENST00000604436 327 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC004832.5-201ENST00000608677 401 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AP000238.1-201ENST00000608759 426 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AP004607.9-201ENST00000618202 316 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.35□□□□□ -1.87
COL2A1P02458 AC099654.12-201ENST00000639868 649 ntBASIC3.35□□□□□ -1.87
COL2A1P02458 AC011477.1-204ENST00000623416 1325 ntBASIC3.34□□□□□ -1.87
COL2A1P02458 AC022031.1-201ENST00000585985 2593 ntBASIC3.34□□□□□ -1.87
COL2A1P02458 AC007342.7-201ENST00000624610 2337 ntBASIC3.34□□□□□ -1.87
COL2A1P02458 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL2A1P02458 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
COL2A1P02458 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
COL2A1P02458 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL2A1P02458 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL2A1P02458 METTL21EP-201ENST00000298105 713 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 SNORD115-47-201ENST00000391226 86 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 SNORA68.2-201ENST00000391263 128 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL2A1P02458 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.34□□□□□ -1.88
COL2A1P02458 MTCYBP38-201ENST00000417160 1123 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 B3GNT2P1-201ENST00000434960 952 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AC092170.1-201ENST00000440211 356 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.34□□□□□ -1.88
COL2A1P02458 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.34□□□□□ -1.88
COL2A1P02458 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.34□□□□□ -1.88
COL2A1P02458 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.34□□□□□ -1.88
COL2A1P02458 COX6CP12-201ENST00000446748 202 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 ST13P20-201ENST00000447996 1065 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 TPT1P14-201ENST00000448018 505 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.34□□□□□ -1.88
COL2A1P02458 snoU13.23-201ENST00000458863 104 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AP001025.2-201ENST00000490908 477 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 MTND2P33-201ENST00000506452 1031 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AC090071.1-201ENST00000507713 644 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.34□□□□□ -1.88
COL2A1P02458 AC010587.2-201ENST00000511727 448 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.34□□□□□ -1.88
COL2A1P02458 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 RNU6-314P-201ENST00000516574 104 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 RNU6-678P-201ENST00000516832 109 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.34□□□□□ -1.88
COL2A1P02458 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.34□□□□□ -1.88
COL2A1P02458 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.34□□□□□ -1.88
COL2A1P02458 OR4C2P-201ENST00000530855 1064 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.34□□□□□ -1.88
COL2A1P02458 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.34□□□□□ -1.88
COL2A1P02458 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.34□□□□□ -1.88
COL2A1P02458 AL121839.1-201ENST00000556233 1185 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.34□□□□□ -1.88
COL2A1P02458 AC002400.1-201ENST00000569310 726 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AP001542.2-201ENST00000593141 364 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 AC098826.3-201ENST00000603823 466 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms