Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.82□□□□□ -2.12
TNFP01375 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TNFP01375 MIR548Y-201ENST00000582739 110 ntBASIC1.82□□□□□ -2.12
TNFP01375 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.82□□□□□ -2.12
TNFP01375 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.82□□□□□ -2.12
TNFP01375 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TNFP01375 AC131280.1-202ENST00000624067 4211 ntBASIC1.82□□□□□ -2.12
TNFP01375 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TNFP01375 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
TNFP01375 AP005901.5-201ENST00000545779 1796 ntBASIC1.81□□□□□ -2.12
TNFP01375 RNU4-52P-201ENST00000384209 138 ntBASIC1.81□□□□□ -2.12
TNFP01375 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TNFP01375 AL513331.1-201ENST00000411908 397 ntBASIC1.81□□□□□ -2.12
TNFP01375 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.81□□□□□ -2.12
TNFP01375 AC114973.1-201ENST00000429057 632 ntBASIC1.81□□□□□ -2.12
TNFP01375 OR4K11P-201ENST00000431829 904 ntBASIC1.81□□□□□ -2.12
TNFP01375 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TNFP01375 MTCYBP34-201ENST00000439552 670 ntBASIC1.81□□□□□ -2.12
TNFP01375 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
TNFP01375 AL513321.1-201ENST00000441175 761 ntBASIC1.81□□□□□ -2.12
TNFP01375 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.81□□□□□ -2.12
TNFP01375 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.81□□□□□ -2.12
TNFP01375 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.81□□□□□ -2.12
TNFP01375 RNU6-717P-201ENST00000459076 104 ntBASIC1.81□□□□□ -2.12
TNFP01375 RPS20P22-201ENST00000473700 357 ntBASIC1.81□□□□□ -2.12
TNFP01375 AL135752.1-201ENST00000479477 471 ntBASIC1.81□□□□□ -2.12
TNFP01375 AC108734.3-201ENST00000481241 1165 ntBASIC1.81□□□□□ -2.12
TNFP01375 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TNFP01375 GTF2IP9-201ENST00000502460 301 ntBASIC1.81□□□□□ -2.12
TNFP01375 AC011352.3-201ENST00000505162 593 ntBASIC1.81□□□□□ -2.12
TNFP01375 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.81□□□□□ -2.12
TNFP01375 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.81□□□□□ -2.12
TNFP01375 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.81□□□□□ -2.12
TNFP01375 NDUFS5P6-201ENST00000529136 295 ntBASIC1.81□□□□□ -2.12
TNFP01375 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.81□□□□□ -2.12
TNFP01375 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.81□□□□□ -2.12
TNFP01375 AC007375.1-201ENST00000554513 578 ntBASIC1.81□□□□□ -2.12
TNFP01375 RPS15AP11-201ENST00000594193 385 ntBASIC1.81□□□□□ -2.12
TNFP01375 AL356280.1-201ENST00000603614 379 ntBASIC1.81□□□□□ -2.12
TNFP01375 AC112503.2-201ENST00000609005 552 ntBASIC1.81□□□□□ -2.12
TNFP01375 AC245884.12-201ENST00000615364 59 ntBASIC1.81□□□□□ -2.12
TNFP01375 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.81□□□□□ -2.12
TNFP01375 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.81□□□□□ -2.12
TNFP01375 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TNFP01375 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.81□□□□□ -2.12
TNFP01375 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
TNFP01375 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.81□□□□□ -2.12
TNFP01375 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TNFP01375 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TNFP01375 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TNFP01375 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.8□□□□□ -2.12
TNFP01375 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TNFP01375 U3.40-201ENST00000408706 208 ntBASIC1.8□□□□□ -2.12
TNFP01375 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.8□□□□□ -2.12
TNFP01375 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.8□□□□□ -2.12
TNFP01375 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.8□□□□□ -2.12
TNFP01375 FAM172BP-201ENST00000487497 1089 ntBASIC1.8□□□□□ -2.12
TNFP01375 AC008427.1-201ENST00000503102 655 ntBASIC1.8□□□□□ -2.12
TNFP01375 AC091917.2-201ENST00000505002 744 ntBASIC1.8□□□□□ -2.12
TNFP01375 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.8□□□□□ -2.12
TNFP01375 AC016065.2-201ENST00000514530 444 ntBASIC1.8□□□□□ -2.12
TNFP01375 SNORA25.15-201ENST00000516487 89 ntBASIC1.8□□□□□ -2.12
TNFP01375 RNU6-1308P-201ENST00000516817 103 ntBASIC1.8□□□□□ -2.12
TNFP01375 RN7SKP219-201ENST00000516825 296 ntBASIC1.8□□□□□ -2.12
TNFP01375 HMGB1P46-201ENST00000520062 610 ntBASIC1.8□□□□□ -2.12
TNFP01375 AC025755.1-201ENST00000521306 278 ntBASIC1.8□□□□□ -2.12
TNFP01375 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.8□□□□□ -2.12
TNFP01375 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.8□□□□□ -2.12
TNFP01375 AC009127.3-201ENST00000570531 403 ntBASIC1.8□□□□□ -2.12
TNFP01375 OR1M4P-201ENST00000589199 287 ntBASIC1.8□□□□□ -2.12
TNFP01375 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TNFP01375 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.8□□□□□ -2.12
TNFP01375 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
TNFP01375 AC068880.5-201ENST00000624331 290 ntBASIC1.8□□□□□ -2.12
TNFP01375 AP000553.5-201ENST00000641933 54 ntBASIC1.8□□□□□ -2.12
TNFP01375 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TNFP01375 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.8□□□□□ -2.12
TNFP01375 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
TNFP01375 AC009902.3-201ENST00000606235 2172 ntBASIC1.79□□□□□ -2.12
TNFP01375 AC090740.1-201ENST00000623193 2262 ntBASIC1.79□□□□□ -2.12
TNFP01375 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TNFP01375 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
TNFP01375 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.79□□□□□ -2.12
TNFP01375 SPA17P1-201ENST00000416656 452 ntBASIC1.79□□□□□ -2.12
TNFP01375 MTCO3P12-201ENST00000416718 547 ntBASIC1.79□□□□□ -2.12
TNFP01375 HMGN2P38-201ENST00000423806 265 ntBASIC1.79□□□□□ -2.12
TNFP01375 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.79□□□□□ -2.12
TNFP01375 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFP01375 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TNFP01375 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFP01375 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.79□□□□□ -2.12
TNFP01375 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.79□□□□□ -2.12
TNFP01375 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFP01375 AP001804.3-201ENST00000525146 880 ntBASIC1.79□□□□□ -2.12
TNFP01375 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
TNFP01375 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.79□□□□□ -2.12
TNFP01375 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.79□□□□□ -2.12
TNFP01375 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.79□□□□□ -2.12
TNFP01375 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.79□□□□□ -2.12
TNFP01375 AC135178.6-201ENST00000605314 398 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms