Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.98□□□□□ -1.45
ALDH1A1P00352 HNRNPCP4-201ENST00000571636 900 ntBASIC5.98□□□□□ -1.45
ALDH1A1P00352 MIR3144-201ENST00000579460 79 ntBASIC5.98□□□□□ -1.45
ALDH1A1P00352 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ALDH1A1P00352 AL590392.1-201ENST00000604960 446 ntBASIC5.98□□□□□ -1.45
ALDH1A1P00352 AL591516.1-201ENST00000611326 274 ntBASIC5.98□□□□□ -1.45
ALDH1A1P00352 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.98□□□□□ -1.45
ALDH1A1P00352 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ALDH1A1P00352 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ALDH1A1P00352 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ALDH1A1P00352 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ALDH1A1P00352 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ALDH1A1P00352 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.98□□□□□ -1.45
ALDH1A1P00352 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ALDH1A1P00352 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ALDH1A1P00352 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 AL034549.2-201ENST00000618285 3373 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 RNU6-47P-201ENST00000383866 107 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 SNORA70.9-201ENST00000384370 135 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 RNU6-959P-201ENST00000384671 107 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 MIR137-201ENST00000385223 102 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 RNU6-1154P-201ENST00000391001 104 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 AL139039.1-201ENST00000401900 692 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 RPS29P13-201ENST00000402041 169 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 RN7SKP51-201ENST00000410781 304 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 RN7SKP100-201ENST00000411258 284 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 AL591704.1-201ENST00000432574 275 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 PPIAP3-201ENST00000450588 505 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 RPS17P5-201ENST00000498293 408 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 AC104576.1-201ENST00000524225 88 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 AC136932.1-201ENST00000574771 208 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 MIR4300-201ENST00000581016 96 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 MIR4273-201ENST00000582824 84 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 AP000769.2-201ENST00000602344 396 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 AC243654.2-201ENST00000612843 443 ntBASIC5.97□□□□□ -1.45
ALDH1A1P00352 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
ALDH1A1P00352 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.97□□□□□ -1.45
ALDH1A1P00352 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.96□□□□□ -1.45
ALDH1A1P00352 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.96□□□□□ -1.45
ALDH1A1P00352 AC022893.2-201ENST00000564832 3296 ntBASIC5.96□□□□□ -1.45
ALDH1A1P00352 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ALDH1A1P00352 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
ALDH1A1P00352 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ALDH1A1P00352 RNU6-1226P-201ENST00000384317 107 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 RNU6-729P-201ENST00000384399 107 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 SNORD56.6-201ENST00000384569 71 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ALDH1A1P00352 U3.42-201ENST00000408746 214 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 RNU6-394P-201ENST00000410735 107 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.96□□□□□ -1.46
ALDH1A1P00352 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.96□□□□□ -1.46
ALDH1A1P00352 AL031659.1-201ENST00000447075 539 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 NUTF2P3-201ENST00000448540 384 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 RPL12P39-201ENST00000455456 496 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 AC010326.1-201ENST00000462726 602 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ALDH1A1P00352 AC135721.1-201ENST00000497954 479 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 RN7SKP122-201ENST00000515923 296 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 Y_RNA.662-201ENST00000516028 97 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 RNA5SP43-201ENST00000516559 110 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.96□□□□□ -1.46
ALDH1A1P00352 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.96□□□□□ -1.46
ALDH1A1P00352 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.96□□□□□ -1.46
ALDH1A1P00352 AL670379.6-201ENST00000603753 252 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 AL670379.1-201ENST00000604752 252 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 AL670379.5-201ENST00000605253 252 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 AL670379.8-201ENST00000605353 252 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 AL670379.7-201ENST00000605823 252 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 MIR376A1-201ENST00000616574 68 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 AL590240.4-201ENST00000616908 390 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 CR392039.4-201ENST00000624968 501 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 U6.106-201ENST00000636360 105 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.96□□□□□ -1.46
ALDH1A1P00352 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ALDH1A1P00352 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
ALDH1A1P00352 AC068769.1-201ENST00000474767 2426 ntBASIC5.96□□□□□ -1.46
ALDH1A1P00352 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ALDH1A1P00352 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ALDH1A1P00352 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ALDH1A1P00352 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ALDH1A1P00352 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ALDH1A1P00352 AL137003.2-201ENST00000606924 2538 ntBASIC5.95□□□□□ -1.46
ALDH1A1P00352 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms