Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC138749.5-201ENST00000611461 208 ntBASIC3.19□□□□□ -1.9
CLDN1O95832 AC010678.1-201ENST00000614118 713 ntBASIC3.19□□□□□ -1.9
CLDN1O95832 AL162274.2-201ENST00000614406 332 ntBASIC3.19□□□□□ -1.9
CLDN1O95832 AC116165.2-201ENST00000616705 206 ntBASIC3.19□□□□□ -1.9
CLDN1O95832 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN1O95832 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN1O95832 AC091905.1-201ENST00000624400 311 ntBASIC3.19□□□□□ -1.9
CLDN1O95832 AL603839.4-201ENST00000624658 1005 ntBASIC3.19□□□□□ -1.9
CLDN1O95832 AC093591.3-201ENST00000634516 308 ntBASIC3.19□□□□□ -1.9
CLDN1O95832 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN1O95832 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN1O95832 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN1O95832 AL353746.1-201ENST00000566293 6881 ntBASIC3.19□□□□□ -1.9
CLDN1O95832 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN1O95832 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN1O95832 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN1O95832 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 AL049780.3-201ENST00000624612 1583 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 AL161781.1-201ENST00000354277 403 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 RNU6-28P-201ENST00000362378 107 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 RNY4P24-201ENST00000362735 96 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 RNU6-989P-201ENST00000362756 107 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 Y_RNA.234-201ENST00000364409 97 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 RNU4-75P-201ENST00000364621 146 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 RNU5E-5P-201ENST00000365379 116 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 RNU6-359P-201ENST00000365466 108 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 SNORD115.1-201ENST00000391109 76 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 DEFB108C-201ENST00000400154 252 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 MIR1250-201ENST00000408098 113 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 RNU2-16P-201ENST00000410712 136 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AC007899.1-201ENST00000412776 775 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 DLGAP5P1-201ENST00000430307 464 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 MTCYBP45-201ENST00000435243 565 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN1O95832 AL031667.1-201ENST00000440222 725 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN1O95832 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN1O95832 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN1O95832 AL136097.1-201ENST00000456945 913 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 CEACAMP4-201ENST00000457676 421 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AP001086.1-201ENST00000494882 321 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC010625.1-201ENST00000511296 403 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC116347.2-201ENST00000514912 523 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 RNU6-1003P-201ENST00000517099 105 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN1O95832 SUMO2P20-201ENST00000520803 283 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AP002748.2-201ENST00000528671 348 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AP003385.6-201ENST00000531603 374 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC090877.1-201ENST00000561418 344 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 MIR5680-201ENST00000577577 84 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN1O95832 MIR548AB-201ENST00000584917 84 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC007687.1-201ENST00000602704 304 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AL136363.2-201ENST00000604173 851 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AC103591.3-201ENST00000608684 209 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN1O95832 AC012531.5-201ENST00000611375 151 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 MIR6715A-201ENST00000615929 79 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 AC244205.2-202ENST00000635781 342 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 CRYM-AS1-204ENST00000637983 556 ntBASIC3.18□□□□□ -1.9
CLDN1O95832 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN1O95832 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN1O95832 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN1O95832 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 RNA5SP258-201ENST00000362750 119 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 OR5H15-201ENST00000383696 930 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 RNU6-821P-201ENST00000390995 107 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 MTCYBP36-201ENST00000404146 440 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 RPL5P18-201ENST00000406671 891 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AL663109.1-201ENST00000411498 844 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN1O95832 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN1O95832 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN1O95832 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms