Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
USH2AO75445 MIR3074-201ENST00000384885 81 ntBASIC0.72□□□□□ -2.29
USH2AO75445 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
USH2AO75445 HMGB1P45-201ENST00000435986 653 ntBASIC0.72□□□□□ -2.29
USH2AO75445 IPO7P1-201ENST00000442031 636 ntBASIC0.72□□□□□ -2.29
USH2AO75445 ARL2BPP4-201ENST00000506854 471 ntBASIC0.72□□□□□ -2.29
USH2AO75445 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.72□□□□□ -2.29
USH2AO75445 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC0.72□□□□□ -2.29
USH2AO75445 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
USH2AO75445 AL033519.2-201ENST00000403958 392 ntBASIC0.72□□□□□ -2.29
USH2AO75445 RNA5SP127-201ENST00000411051 133 ntBASIC0.72□□□□□ -2.29
USH2AO75445 SETP8-201ENST00000435341 628 ntBASIC0.72□□□□□ -2.29
USH2AO75445 AC108059.3-201ENST00000456388 214 ntBASIC0.72□□□□□ -2.29
USH2AO75445 SUMO2P6-201ENST00000505273 288 ntBASIC0.72□□□□□ -2.29
USH2AO75445 AC090751.1-201ENST00000566966 267 ntBASIC0.72□□□□□ -2.29
USH2AO75445 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.72□□□□□ -2.29
USH2AO75445 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
USH2AO75445 MIR1323-201ENST00000408090 73 ntBASIC0.71□□□□□ -2.29
USH2AO75445 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC0.71□□□□□ -2.29
USH2AO75445 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.71□□□□□ -2.29
USH2AO75445 IGHVIII-5-1-201ENST00000523059 99 ntBASIC0.71□□□□□ -2.29
USH2AO75445 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.71□□□□□ -2.29
USH2AO75445 AC068135.2-201ENST00000569293 1028 ntBASIC0.71□□□□□ -2.29
USH2AO75445 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC0.71□□□□□ -2.29
USH2AO75445 AC011492.1-201ENST00000600023 315 ntBASIC0.71□□□□□ -2.29
USH2AO75445 AP000676.4-201ENST00000624659 623 ntBASIC0.71□□□□□ -2.29
USH2AO75445 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.71□□□□□ -2.3
USH2AO75445 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
USH2AO75445 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AL445305.1-201ENST00000432577 575 ntBASIC0.71□□□□□ -2.3
USH2AO75445 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC0.71□□□□□ -2.3
USH2AO75445 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC0.71□□□□□ -2.3
USH2AO75445 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC0.71□□□□□ -2.3
USH2AO75445 AL449363.1-201ENST00000617815 186 ntBASIC0.71□□□□□ -2.3
USH2AO75445 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
USH2AO75445 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
USH2AO75445 RNU1-133P-201ENST00000364867 167 ntBASIC0.71□□□□□ -2.3
USH2AO75445 MUPP-201ENST00000438111 566 ntBASIC0.71□□□□□ -2.3
USH2AO75445 ARL5AP3-201ENST00000439327 386 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AL162388.1-201ENST00000450912 352 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 RPL30P6-201ENST00000475925 342 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AC004223.1-201ENST00000479840 271 ntBASIC0.71□□□□□ -2.3
USH2AO75445 RPL9P33-201ENST00000484311 566 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AC008885.2-201ENST00000509506 930 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC0.71□□□□□ -2.3
USH2AO75445 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.71□□□□□ -2.3
USH2AO75445 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 AC018690.1-201ENST00000608144 626 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AC012640.5-201ENST00000623897 319 ntBASIC0.71□□□□□ -2.3
USH2AO75445 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AC110491.1-201ENST00000562191 2010 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.71□□□□□ -2.3
USH2AO75445 RNU4-91P-201ENST00000364778 135 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 AP002345.1-201ENST00000456493 928 ntBASIC0.71□□□□□ -2.3
USH2AO75445 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
USH2AO75445 MTND5P9-201ENST00000503854 1755 ntBASIC0.71□□□□□ -2.3
USH2AO75445 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
USH2AO75445 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC0.71□□□□□ -2.3
USH2AO75445 RNU4-13P-201ENST00000364019 141 ntBASIC0.71□□□□□ -2.3
USH2AO75445 Y_RNA.324-201ENST00000365165 102 ntBASIC0.71□□□□□ -2.3
USH2AO75445 DYNLT3P1-201ENST00000378574 347 ntBASIC0.71□□□□□ -2.3
USH2AO75445 Y_RNA.549-201ENST00000384657 102 ntBASIC0.71□□□□□ -2.3
USH2AO75445 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 AC084364.2-201ENST00000546924 395 ntBASIC0.71□□□□□ -2.3
USH2AO75445 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.71□□□□□ -2.3
USH2AO75445 AC097504.2-201ENST00000608088 454 ntBASIC0.71□□□□□ -2.3
USH2AO75445 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
USH2AO75445 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
USH2AO75445 HSPE1P11-201ENST00000339579 310 ntBASIC0.7□□□□□ -2.3
USH2AO75445 RNY4P3-201ENST00000365254 95 ntBASIC0.7□□□□□ -2.3
USH2AO75445 Y_RNA.518-201ENST00000384552 113 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.7□□□□□ -2.3
USH2AO75445 AC078918.1-201ENST00000498515 228 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.7□□□□□ -2.3
USH2AO75445 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC0.7□□□□□ -2.3
USH2AO75445 AC008126.1-201ENST00000549019 480 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AC008127.2-201ENST00000549925 1075 ntBASIC0.7□□□□□ -2.3
USH2AO75445 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.7□□□□□ -2.3
USH2AO75445 AC013444.2-201ENST00000603317 787 ntBASIC0.7□□□□□ -2.3
USH2AO75445 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
USH2AO75445 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.7□□□□□ -2.3
USH2AO75445 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.7□□□□□ -2.3
USH2AO75445 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC0.7□□□□□ -2.3
USH2AO75445 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
USH2AO75445 MTCO1P14-201ENST00000441695 1559 ntBASIC0.7□□□□□ -2.3
USH2AO75445 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
USH2AO75445 RPL26P37-201ENST00000411983 438 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC0.7□□□□□ -2.3
USH2AO75445 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC0.7□□□□□ -2.3
USH2AO75445 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.7□□□□□ -2.3
USH2AO75445 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.7□□□□□ -2.3
USH2AO75445 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms