Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC022795.1-201ENST00000473808 480 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 RPS3AP50-201ENST00000487064 803 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.13□□□□□ -1.59
VAMP4O75379 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.13□□□□□ -1.59
VAMP4O75379 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.13□□□□□ -1.59
VAMP4O75379 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.13□□□□□ -1.59
VAMP4O75379 DEFB109D-201ENST00000529497 240 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.13□□□□□ -1.59
VAMP4O75379 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.13□□□□□ -1.59
VAMP4O75379 OR8R1P-201ENST00000543943 764 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 AC011611.1-201ENST00000552179 197 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.13□□□□□ -1.59
VAMP4O75379 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.13□□□□□ -1.59
VAMP4O75379 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.13□□□□□ -1.59
VAMP4O75379 AC010928.3-201ENST00000587712 541 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 AC091167.4-201ENST00000605079 184 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 AL050343.2-201ENST00000607338 280 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.13□□□□□ -1.59
VAMP4O75379 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VAMP4O75379 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
VAMP4O75379 ZNF962P-201ENST00000443465 3140 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 AC022893.2-201ENST00000564832 3296 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAMP4O75379 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAMP4O75379 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAMP4O75379 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAMP4O75379 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAMP4O75379 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
VAMP4O75379 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.12□□□□□ -1.59
VAMP4O75379 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAMP4O75379 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.12□□□□□ -1.59
VAMP4O75379 RNU6-1227P-201ENST00000383981 107 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VAMP4O75379 RNU6-510P-201ENST00000391239 108 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 MIR1302-11-201ENST00000408051 138 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 MIR1302-9-201ENST00000408365 138 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 MIR1302-10-201ENST00000408734 138 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 SNORA3C-201ENST00000408792 125 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 RNU2-62P-201ENST00000410868 191 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AC127526.1-201ENST00000417526 366 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.12□□□□□ -1.59
VAMP4O75379 AL691449.1-201ENST00000426570 421 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 ATP5JP1-201ENST00000431631 322 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 SNORD121B-201ENST00000458838 81 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 S100A11P1-201ENST00000477525 312 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AC068587.1-201ENST00000483613 781 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AL163973.1-201ENST00000484753 577 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 HSPD1P15-201ENST00000505573 1122 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 SNORA19.2-201ENST00000516013 114 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.12□□□□□ -1.59
VAMP4O75379 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
VAMP4O75379 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAMP4O75379 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 AC078814.3-201ENST00000553036 491 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.12□□□□□ -1.59
VAMP4O75379 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 AC010525.2-201ENST00000590920 195 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.12□□□□□ -1.59
VAMP4O75379 AP001429.1-201ENST00000602568 530 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.12□□□□□ -1.59
VAMP4O75379 MIR1302-2-201ENST00000607096 138 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AL159972.1-201ENST00000625150 448 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.12□□□□□ -1.59
VAMP4O75379 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.12□□□□□ -1.59
VAMP4O75379 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.12□□□□□ -1.59
VAMP4O75379 RIOK3P1-201ENST00000418778 1528 ntBASIC5.12□□□□□ -1.59
VAMP4O75379 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VAMP4O75379 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.12□□□□□ -1.59
VAMP4O75379 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VAMP4O75379 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VAMP4O75379 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.11□□□□□ -1.59
VAMP4O75379 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VAMP4O75379 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VAMP4O75379 FRG1CP-201ENST00000358464 769 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 RNU6-996P-201ENST00000365438 107 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 RNU6-213P-201ENST00000384051 104 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 MIR708-201ENST00000390708 88 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 RNU6-332P-201ENST00000391193 108 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AL162578.1-201ENST00000406202 378 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.11□□□□□ -1.59
VAMP4O75379 RPS20P5-201ENST00000434808 360 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.11□□□□□ -1.59
VAMP4O75379 NANOGP10-201ENST00000453325 895 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AC078785.3-201ENST00000476607 425 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AC233702.1-201ENST00000482905 502 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AC117522.3-201ENST00000507974 584 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AC105417.1-201ENST00000514691 285 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 RNA5SP179-201ENST00000517284 121 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AC087369.1-201ENST00000520775 996 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AC023050.3-201ENST00000541142 333 ntBASIC5.11□□□□□ -1.59
VAMP4O75379 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.11□□□□□ -1.59
VAMP4O75379 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms