Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL158053.1-201ENST00000441503 453 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AL096829.2-201ENST00000446582 742 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP2AO43633 GSTA11P-201ENST00000452866 669 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 snoU13.28-201ENST00000459235 104 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 HSPE1P6-201ENST00000479457 291 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 RN7SL636P-201ENST00000497504 294 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP2AO43633 AC112518.2-201ENST00000508565 425 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AC027338.1-201ENST00000514840 825 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 MTCO1P47-201ENST00000523889 1271 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP2AO43633 AP003168.1-201ENST00000530091 307 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AC008127.2-201ENST00000549925 1075 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP2AO43633 AC090888.1-201ENST00000561335 1141 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP2AO43633 LARP7P2-201ENST00000575306 125 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP2AO43633 AC079089.3-201ENST00000603094 673 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AL158211.2-201ENST00000607282 395 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AC097504.2-201ENST00000608088 454 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AP000254.1-201ENST00000609934 520 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.72□□□□□ -1.97
CHMP2AO43633 CYP3A51P-201ENST00000633513 256 ntBASIC2.72□□□□□ -1.97
CHMP2AO43633 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.72□□□□□ -1.97
CHMP2AO43633 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.72□□□□□ -1.97
CHMP2AO43633 AC026241.1-201ENST00000517873 2142 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CHMP2AO43633 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHMP2AO43633 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHMP2AO43633 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHMP2AO43633 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CHMP2AO43633 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.71□□□□□ -1.98
CHMP2AO43633 RNU6-198P-201ENST00000384258 104 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 SNORA67.4-201ENST00000384688 142 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 RNU6-1197P-201ENST00000391183 107 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 RNU6-575P-201ENST00000411326 105 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.71□□□□□ -1.98
CHMP2AO43633 AC024082.2-201ENST00000434771 238 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 RPL36AP6-201ENST00000435770 321 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CHMP2AO43633 RFC5P1-201ENST00000454419 874 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 RPL23AP70-201ENST00000483361 460 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.71□□□□□ -1.98
CHMP2AO43633 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.71□□□□□ -1.98
CHMP2AO43633 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.71□□□□□ -1.98
CHMP2AO43633 AIG1P1-201ENST00000503376 148 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.71□□□□□ -1.98
CHMP2AO43633 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.71□□□□□ -1.98
CHMP2AO43633 MTND5P4-201ENST00000514978 288 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.71□□□□□ -1.98
CHMP2AO43633 AP003049.1-201ENST00000529418 457 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.71□□□□□ -1.98
CHMP2AO43633 AC093519.1-201ENST00000566109 298 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 MIR4435-1-201ENST00000582552 80 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 AC046143.2-201ENST00000609789 160 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.71□□□□□ -1.98
CHMP2AO43633 AL356585.4-201ENST00000623078 1229 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
CHMP2AO43633 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.71□□□□□ -1.98
CHMP2AO43633 RNA5SP126-201ENST00000365092 109 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 RNU6-354P-201ENST00000383862 107 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 U6.112-201ENST00000384129 70 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 RNU6-610P-201ENST00000384264 107 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 MTCO2P31-201ENST00000402702 684 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 RNA5SP508-201ENST00000411327 119 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC092638.1-201ENST00000411966 1275 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP2AO43633 SFR1P2-201ENST00000421841 730 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC009414.1-201ENST00000427200 443 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.7□□□□□ -1.98
CHMP2AO43633 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP2AO43633 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.7□□□□□ -1.98
CHMP2AO43633 OR51B8P-201ENST00000449892 769 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC104164.3-201ENST00000467363 1258 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 NAMPTP2-201ENST00000505629 1115 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP2AO43633 AC118282.2-201ENST00000508739 374 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC026436.1-201ENST00000510537 270 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 RNU6-928P-201ENST00000516876 104 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 RNU6-798P-201ENST00000516912 103 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 RNA5SP135-201ENST00000517019 125 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AP001317.1-201ENST00000531194 960 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC090502.2-201ENST00000549267 280 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CHMP2AO43633 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP2AO43633 AC090616.3-201ENST00000582184 217 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.7□□□□□ -1.98
CHMP2AO43633 RPL23AP78-201ENST00000599928 470 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC013444.2-201ENST00000603317 787 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.7□□□□□ -1.98
CHMP2AO43633 AP005229.2-201ENST00000609980 697 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CHMP2AO43633 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.7□□□□□ -1.98
CHMP2AO43633 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
CHMP2AO43633 ZNF849P-201ENST00000594711 1566 ntBASIC2.7□□□□□ -1.98
CHMP2AO43633 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms