Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NPHP1O15259 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPHP1O15259 RPL7P26-201ENST00000333817 754 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 RNU5E-8P-201ENST00000363502 116 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 RNU1-140P-201ENST00000365040 165 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPHP1O15259 Y_RNA.510-201ENST00000384511 114 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NPHP1O15259 TPMTP3-201ENST00000411928 735 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 AC002075.2-201ENST00000425207 252 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 AC233728.2-201ENST00000425348 757 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 MTND1P20-201ENST00000430341 950 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 TXNP1-201ENST00000441872 371 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 AC025750.2-201ENST00000442609 450 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 AL592447.1-201ENST00000447592 540 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 RNU7-170P-201ENST00000459303 61 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 AC004801.2-202ENST00000463559 283 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.18□□□□□ -1.74
NPHP1O15259 POU5F1P7-201ENST00000508759 541 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.18□□□□□ -1.74
NPHP1O15259 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.18□□□□□ -1.74
NPHP1O15259 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP1O15259 MTND5P4-201ENST00000514978 288 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP1O15259 ERHP1-201ENST00000523006 310 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPHP1O15259 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP1O15259 AC015917.1-201ENST00000579654 510 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.18□□□□□ -1.74
NPHP1O15259 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.18□□□□□ -1.74
NPHP1O15259 AP000254.1-201ENST00000609934 520 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 MIR7106-201ENST00000612419 65 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 AC068831.7-201ENST00000616954 363 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.18□□□□□ -1.74
NPHP1O15259 PCMTD1P7-201ENST00000634506 357 ntBASIC4.18□□□□□ -1.74
NPHP1O15259 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NPHP1O15259 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NPHP1O15259 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NPHP1O15259 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP1O15259 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP1O15259 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP1O15259 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
NPHP1O15259 RNA5SP42-201ENST00000364278 115 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 Y_RNA.302-201ENST00000364997 102 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 RNU6-637P-201ENST00000384050 107 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 RNU6-253P-201ENST00000384730 105 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 U3.20-201ENST00000390909 217 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 MIR1305-201ENST00000408300 86 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AC007899.1-201ENST00000412776 775 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.17□□□□□ -1.74
NPHP1O15259 RPL17P49-201ENST00000443728 411 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AC140076.1-201ENST00000449897 361 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 OR6C5P-201ENST00000452388 923 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 RN7SL863P-201ENST00000462370 296 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP1O15259 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP1O15259 AL359273.1-201ENST00000510918 627 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.17□□□□□ -1.74
NPHP1O15259 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP1O15259 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP1O15259 AC068587.4-201ENST00000533893 186 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 ELOCP32-201ENST00000548625 324 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AC002400.1-201ENST00000569310 726 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP1O15259 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP1O15259 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 ISCA1P3-201ENST00000577104 373 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AP000811.1-201ENST00000603803 651 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AC008962.1-201ENST00000605729 304 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NPHP1O15259 AL031667.3-201ENST00000620124 655 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AP002791.1-201ENST00000623291 381 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AL137790.1-201ENST00000634283 177 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.17□□□□□ -1.74
NPHP1O15259 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NPHP1O15259 AC005832.2-201ENST00000538921 1430 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP1O15259 AL021368.2-201ENST00000606125 5352 ntBASIC4.17□□□□□ -1.74
NPHP1O15259 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.17□□□□□ -1.74
NPHP1O15259 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP1O15259 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NPHP1O15259 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NPHP1O15259 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NPHP1O15259 AC009902.3-201ENST00000606235 2172 ntBASIC4.16□□□□□ -1.74
NPHP1O15259 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NPHP1O15259 AC012321.1-201ENST00000561622 1588 ntBASIC4.16□□□□□ -1.74
NPHP1O15259 AP000568.1-201ENST00000282964 442 ntBASIC4.16□□□□□ -1.74
NPHP1O15259 SNORA5B-201ENST00000363786 132 ntBASIC4.16□□□□□ -1.74
NPHP1O15259 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
NPHP1O15259 MIR591-201ENST00000385290 95 ntBASIC4.16□□□□□ -1.74
NPHP1O15259 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.16□□□□□ -1.74
NPHP1O15259 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.16□□□□□ -1.74
NPHP1O15259 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.16□□□□□ -1.74
NPHP1O15259 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.16□□□□□ -1.74
NPHP1O15259 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.16□□□□□ -1.74
NPHP1O15259 UBE2V1P13-201ENST00000436983 439 ntBASIC4.16□□□□□ -1.74
NPHP1O15259 HMGN2P20-201ENST00000437531 273 ntBASIC4.16□□□□□ -1.74
NPHP1O15259 RNA5SP310-201ENST00000459084 116 ntBASIC4.16□□□□□ -1.74
NPHP1O15259 RPL23AP67-201ENST00000465341 474 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms