Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL389915.1-201ENST00000422463 466 ntBASIC2.68□□□□□ -1.98
LSM1O15116 RPL7P44-201ENST00000424827 742 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AL512649.1-201ENST00000428997 581 ntBASIC2.68□□□□□ -1.98
LSM1O15116 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.68□□□□□ -1.98
LSM1O15116 RPS15AP7-201ENST00000439294 405 ntBASIC2.68□□□□□ -1.98
LSM1O15116 PTGES3P1-201ENST00000439531 483 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.68□□□□□ -1.98
LSM1O15116 AL671855.1-201ENST00000446875 1203 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AL592447.1-201ENST00000447592 540 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM1O15116 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.68□□□□□ -1.98
LSM1O15116 BX510359.1-201ENST00000456973 237 ntBASIC2.68□□□□□ -1.98
LSM1O15116 RNU6-420P-201ENST00000458780 107 ntBASIC2.68□□□□□ -1.98
LSM1O15116 RPL23AP70-201ENST00000483361 460 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM1O15116 TMEM251P1-201ENST00000503717 318 ntBASIC2.68□□□□□ -1.98
LSM1O15116 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM1O15116 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.68□□□□□ -1.98
LSM1O15116 AC008837.1-201ENST00000511513 412 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC091826.1-201ENST00000514065 313 ntBASIC2.68□□□□□ -1.98
LSM1O15116 SCGB1D5P-201ENST00000515134 247 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.68□□□□□ -1.98
LSM1O15116 RN7SKP31-201ENST00000516354 278 ntBASIC2.68□□□□□ -1.98
LSM1O15116 SCARNA13-201ENST00000516672 275 ntBASIC2.68□□□□□ -1.98
LSM1O15116 RN7SKP40-201ENST00000517211 242 ntBASIC2.68□□□□□ -1.98
LSM1O15116 RNU1-104P-201ENST00000517280 175 ntBASIC2.68□□□□□ -1.98
LSM1O15116 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.68□□□□□ -1.98
LSM1O15116 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC012493.2-201ENST00000595083 291 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC069304.2-201ENST00000605154 435 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AL136363.1-201ENST00000605349 337 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC099785.1-201ENST00000605697 437 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC069200.1-201ENST00000609511 323 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AL450472.3-201ENST00000615578 367 ntBASIC2.68□□□□□ -1.98
LSM1O15116 MIR6130-201ENST00000619419 109 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC084824.4-201ENST00000620106 731 ntBASIC2.68□□□□□ -1.98
LSM1O15116 CR381653.2-201ENST00000624041 768 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AC068880.5-201ENST00000624331 290 ntBASIC2.68□□□□□ -1.98
LSM1O15116 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LSM1O15116 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
LSM1O15116 AC000403.1-201ENST00000613696 3585 ntBASIC2.68□□□□□ -1.98
LSM1O15116 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LSM1O15116 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
LSM1O15116 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LSM1O15116 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM1O15116 Z99496.1-201ENST00000469424 1477 ntBASIC2.67□□□□□ -1.98
LSM1O15116 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LSM1O15116 MIR422A-201ENST00000362286 90 ntBASIC2.67□□□□□ -1.98
LSM1O15116 SNRPEP2-201ENST00000397592 279 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AL512633.1-201ENST00000399931 655 ntBASIC2.67□□□□□ -1.98
LSM1O15116 MTCO1P56-201ENST00000401674 224 ntBASIC2.67□□□□□ -1.98
LSM1O15116 DHFRP6-201ENST00000401776 268 ntBASIC2.67□□□□□ -1.98
LSM1O15116 RPL7P27-201ENST00000403775 720 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM1O15116 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM1O15116 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM1O15116 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.67□□□□□ -1.98
LSM1O15116 MTCYBP45-201ENST00000435243 565 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AC092427.1-201ENST00000439177 601 ntBASIC2.67□□□□□ -1.98
LSM1O15116 MTCYBP42-201ENST00000444653 1130 ntBASIC2.67□□□□□ -1.98
LSM1O15116 MRPL50P4-201ENST00000446432 475 ntBASIC2.67□□□□□ -1.98
LSM1O15116 OFD1P3Y-201ENST00000453312 783 ntBASIC2.67□□□□□ -1.98
LSM1O15116 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM1O15116 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM1O15116 RPS15AP34-201ENST00000487776 387 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM1O15116 AC135721.1-201ENST00000497954 479 ntBASIC2.67□□□□□ -1.98
LSM1O15116 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM1O15116 AC117522.3-201ENST00000507974 584 ntBASIC2.67□□□□□ -1.98
LSM1O15116 MTCYBP16-201ENST00000509187 1129 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM1O15116 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM1O15116 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM1O15116 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.67□□□□□ -1.98
LSM1O15116 AC103810.1-201ENST00000579873 453 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AC060766.3-201ENST00000591442 263 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AC024153.1-201ENST00000603103 365 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AC068313.1-201ENST00000604028 1008 ntBASIC2.67□□□□□ -1.98
LSM1O15116 MIR92B-201ENST00000607575 96 ntBASIC2.67□□□□□ -1.98
LSM1O15116 AC005332.6-201ENST00000613178 446 ntBASIC2.67□□□□□ -1.98
LSM1O15116 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LSM1O15116 PABPC1P9-201ENST00000426076 1612 ntBASIC2.67□□□□□ -1.98
LSM1O15116 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.67□□□□□ -1.98
LSM1O15116 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
LSM1O15116 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.67□□□□□ -1.98
LSM1O15116 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LSM1O15116 MIR6073-201ENST00000352083 89 ntBASIC2.66□□□□□ -1.98
LSM1O15116 DEFA7P-201ENST00000382676 285 ntBASIC2.66□□□□□ -1.98
LSM1O15116 Y_RNA.548-201ENST00000384656 105 ntBASIC2.66□□□□□ -1.98
LSM1O15116 AL603865.2-201ENST00000401679 213 ntBASIC2.66□□□□□ -1.98
LSM1O15116 HMGB1P17-201ENST00000403495 628 ntBASIC2.66□□□□□ -1.98
LSM1O15116 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LSM1O15116 USP9YP21-201ENST00000420603 432 ntBASIC2.66□□□□□ -1.98
LSM1O15116 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM1O15116 AC022018.1-201ENST00000430685 241 ntBASIC2.66□□□□□ -1.98
LSM1O15116 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM1O15116 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM1O15116 MTND2P20-201ENST00000440805 661 ntBASIC2.66□□□□□ -1.98
LSM1O15116 AC009237.8-201ENST00000445492 379 ntBASIC2.66□□□□□ -1.98
LSM1O15116 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms