Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SOX1O00570 SMIM11P1-201ENST00000369586 178 ntBASIC5.22□□□□□ -1.57
SOX1O00570 SNORA70.10-201ENST00000384515 134 ntBASIC5.22□□□□□ -1.57
SOX1O00570 RNU11-4P-201ENST00000391149 133 ntBASIC5.22□□□□□ -1.57
SOX1O00570 U3.35-201ENST00000408405 208 ntBASIC5.22□□□□□ -1.57
SOX1O00570 AC114755.2-201ENST00000413520 361 ntBASIC5.22□□□□□ -1.57
SOX1O00570 EIF4EP1-201ENST00000422311 642 ntBASIC5.22□□□□□ -1.57
SOX1O00570 RPL7P37-201ENST00000425095 738 ntBASIC5.22□□□□□ -1.57
SOX1O00570 RPS29P17-201ENST00000430795 166 ntBASIC5.22□□□□□ -1.57
SOX1O00570 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX1O00570 AC012123.2-201ENST00000485809 248 ntBASIC5.22□□□□□ -1.57
SOX1O00570 RPL22P13-201ENST00000493291 347 ntBASIC5.22□□□□□ -1.57
SOX1O00570 AP001086.1-201ENST00000494882 321 ntBASIC5.22□□□□□ -1.57
SOX1O00570 RNY3P15-201ENST00000516297 97 ntBASIC5.22□□□□□ -1.57
SOX1O00570 RNU6-323P-201ENST00000521915 107 ntBASIC5.22□□□□□ -1.57
SOX1O00570 CYCSP27-201ENST00000527643 293 ntBASIC5.22□□□□□ -1.57
SOX1O00570 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX1O00570 AC026371.1-201ENST00000551867 419 ntBASIC5.22□□□□□ -1.57
SOX1O00570 AC005899.2-201ENST00000584353 90 ntBASIC5.22□□□□□ -1.57
SOX1O00570 AC110743.1-201ENST00000584870 478 ntBASIC5.22□□□□□ -1.57
SOX1O00570 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.22□□□□□ -1.57
SOX1O00570 AL365434.2-201ENST00000607979 234 ntBASIC5.22□□□□□ -1.57
SOX1O00570 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.22□□□□□ -1.57
SOX1O00570 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.22□□□□□ -1.57
SOX1O00570 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.22□□□□□ -1.57
SOX1O00570 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.22□□□□□ -1.57
SOX1O00570 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 AC138907.8-201ENST00000623981 2256 ntBASIC5.22□□□□□ -1.57
SOX1O00570 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 AL138820.1-201ENST00000617901 5305 ntBASIC5.22□□□□□ -1.57
SOX1O00570 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX1O00570 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.22□□□□□ -1.57
SOX1O00570 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SOX1O00570 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SOX1O00570 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SOX1O00570 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SOX1O00570 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
SOX1O00570 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SOX1O00570 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.21□□□□□ -1.57
SOX1O00570 AC091812.1-201ENST00000432235 1948 ntBASIC5.21□□□□□ -1.57
SOX1O00570 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX1O00570 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX1O00570 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX1O00570 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX1O00570 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SOX1O00570 SNORD62.1-201ENST00000362541 86 ntBASIC5.21□□□□□ -1.58
SOX1O00570 Y_RNA.380-201ENST00000365663 111 ntBASIC5.21□□□□□ -1.58
SOX1O00570 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SOX1O00570 RNU6-823P-201ENST00000391042 103 ntBASIC5.21□□□□□ -1.58
SOX1O00570 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX1O00570 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.21□□□□□ -1.58
SOX1O00570 RN7SKP17-201ENST00000411242 351 ntBASIC5.21□□□□□ -1.58
SOX1O00570 AC093578.1-201ENST00000415219 368 ntBASIC5.21□□□□□ -1.58
SOX1O00570 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX1O00570 UBE2FP1-201ENST00000416536 447 ntBASIC5.21□□□□□ -1.58
SOX1O00570 RPS12P5-201ENST00000423449 371 ntBASIC5.21□□□□□ -1.58
SOX1O00570 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX1O00570 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX1O00570 MTCO3P45-201ENST00000443036 613 ntBASIC5.21□□□□□ -1.58
SOX1O00570 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.21□□□□□ -1.58
SOX1O00570 AC239809.1-201ENST00000450470 217 ntBASIC5.21□□□□□ -1.58
SOX1O00570 HMGB3P30-201ENST00000457863 606 ntBASIC5.21□□□□□ -1.58
SOX1O00570 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.21□□□□□ -1.58
SOX1O00570 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX1O00570 RNU2-69P-201ENST00000516061 100 ntBASIC5.21□□□□□ -1.58
SOX1O00570 SNORA74D-201ENST00000516404 141 ntBASIC5.21□□□□□ -1.58
SOX1O00570 AP003730.1-201ENST00000524605 285 ntBASIC5.21□□□□□ -1.58
SOX1O00570 AC022882.1-201ENST00000532142 501 ntBASIC5.21□□□□□ -1.58
SOX1O00570 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.21□□□□□ -1.58
SOX1O00570 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX1O00570 RPL23AP84-201ENST00000571193 464 ntBASIC5.21□□□□□ -1.58
SOX1O00570 AC060780.2-201ENST00000589047 198 ntBASIC5.21□□□□□ -1.58
SOX1O00570 AL355297.3-201ENST00000604082 446 ntBASIC5.21□□□□□ -1.58
SOX1O00570 AL589994.2-201ENST00000621124 579 ntBASIC5.21□□□□□ -1.58
SOX1O00570 AC039056.2-201ENST00000622261 511 ntBASIC5.21□□□□□ -1.58
SOX1O00570 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX1O00570 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
SOX1O00570 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX1O00570 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SOX1O00570 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX1O00570 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.21□□□□□ -1.58
SOX1O00570 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SOX1O00570 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
SOX1O00570 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 AC133552.1-201ENST00000569988 4007 ntBASIC5.2□□□□□ -1.58
SOX1O00570 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SOX1O00570 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 AC020633.1-201ENST00000468439 2247 ntBASIC5.2□□□□□ -1.58
SOX1O00570 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX1O00570 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
SOX1O00570 AP001284.1-201ENST00000528393 2118 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms