Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX4O00257 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX4O00257 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX4O00257 AC093106.2-201ENST00000428212 385 ntBASIC4.52□□□□□ -1.69
CBX4O00257 SRIP2-201ENST00000428470 166 ntBASIC4.52□□□□□ -1.69
CBX4O00257 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.52□□□□□ -1.69
CBX4O00257 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.52□□□□□ -1.69
CBX4O00257 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX4O00257 RPL7P12-201ENST00000446719 750 ntBASIC4.52□□□□□ -1.69
CBX4O00257 NUTF2P3-201ENST00000448540 384 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX4O00257 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX4O00257 DHFRP3-201ENST00000455595 559 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AL445433.1-201ENST00000457507 257 ntBASIC4.52□□□□□ -1.69
CBX4O00257 SNRPFP3-201ENST00000457792 225 ntBASIC4.52□□□□□ -1.69
CBX4O00257 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.52□□□□□ -1.69
CBX4O00257 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.52□□□□□ -1.69
CBX4O00257 RN7SL810P-201ENST00000493031 276 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX4O00257 AC092436.1-201ENST00000506450 503 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX4O00257 SUMO2P20-201ENST00000520803 283 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AC243972.3-201ENST00000539655 198 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.52□□□□□ -1.69
CBX4O00257 AC024619.4-201ENST00000580924 316 ntBASIC4.52□□□□□ -1.69
CBX4O00257 VN1R85P-201ENST00000601587 426 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.52□□□□□ -1.69
CBX4O00257 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX4O00257 ZYXP1-201ENST00000617638 118 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AC015967.1-201ENST00000619893 476 ntBASIC4.52□□□□□ -1.69
CBX4O00257 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AL353748.2-201ENST00000622148 471 ntBASIC4.52□□□□□ -1.69
CBX4O00257 AC004925.1-201ENST00000624256 2706 ntBASIC4.52□□□□□ -1.69
CBX4O00257 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX4O00257 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CBX4O00257 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CBX4O00257 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CBX4O00257 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.52□□□□□ -1.69
CBX4O00257 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CBX4O00257 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CBX4O00257 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.51□□□□□ -1.69
CBX4O00257 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CBX4O00257 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.51□□□□□ -1.69
CBX4O00257 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.51□□□□□ -1.69
CBX4O00257 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CBX4O00257 OR5P1P-201ENST00000299512 925 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AL139276.1-201ENST00000311910 1001 ntBASIC4.51□□□□□ -1.69
CBX4O00257 Y_RNA.142-201ENST00000363491 102 ntBASIC4.51□□□□□ -1.69
CBX4O00257 RNU6-61P-201ENST00000365528 109 ntBASIC4.51□□□□□ -1.69
CBX4O00257 RNU6-701P-201ENST00000384059 107 ntBASIC4.51□□□□□ -1.69
CBX4O00257 RNU6-76P-201ENST00000384060 104 ntBASIC4.51□□□□□ -1.69
CBX4O00257 SNORD96B-201ENST00000386148 79 ntBASIC4.51□□□□□ -1.69
CBX4O00257 MIR3065-201ENST00000390137 79 ntBASIC4.51□□□□□ -1.69
CBX4O00257 NDUFS5P1-201ENST00000405668 289 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.51□□□□□ -1.69
CBX4O00257 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.51□□□□□ -1.69
CBX4O00257 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.51□□□□□ -1.69
CBX4O00257 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.51□□□□□ -1.69
CBX4O00257 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
CBX4O00257 ERLEC1P1-201ENST00000433806 578 ntBASIC4.51□□□□□ -1.69
CBX4O00257 HMGB3P9-201ENST00000441799 583 ntBASIC4.51□□□□□ -1.69
CBX4O00257 GAPDHP27-201ENST00000447427 1020 ntBASIC4.51□□□□□ -1.69
CBX4O00257 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CBX4O00257 MTND3P16-201ENST00000452205 344 ntBASIC4.51□□□□□ -1.69
CBX4O00257 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CBX4O00257 AL162395.1-201ENST00000457882 422 ntBASIC4.51□□□□□ -1.69
CBX4O00257 RPL23AP11-201ENST00000475260 469 ntBASIC4.51□□□□□ -1.69
CBX4O00257 VN1R105P-201ENST00000486595 910 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AC091885.1-201ENST00000506658 268 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.51□□□□□ -1.69
CBX4O00257 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.51□□□□□ -1.69
CBX4O00257 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.51□□□□□ -1.69
CBX4O00257 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.51□□□□□ -1.69
CBX4O00257 ERHP1-201ENST00000523006 310 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AC022690.1-201ENST00000526681 550 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AP005435.4-201ENST00000529514 284 ntBASIC4.51□□□□□ -1.69
CBX4O00257 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.51□□□□□ -1.69
CBX4O00257 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.51□□□□□ -1.69
CBX4O00257 AC106785.1-201ENST00000565935 262 ntBASIC4.51□□□□□ -1.69
CBX4O00257 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.51□□□□□ -1.69
CBX4O00257 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.51□□□□□ -1.69
CBX4O00257 C8orf59P2-201ENST00000603441 271 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AC013553.2-201ENST00000604244 589 ntBASIC4.51□□□□□ -1.69
CBX4O00257 SDR42E1P2-201ENST00000614861 481 ntBASIC4.51□□□□□ -1.69
CBX4O00257 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.51□□□□□ -1.69
CBX4O00257 MIR6891-201ENST00000618788 93 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AC011155.2-201ENST00000623202 216 ntBASIC4.51□□□□□ -1.69
CBX4O00257 AC022140.2-201ENST00000623500 188 ntBASIC4.51□□□□□ -1.69
CBX4O00257 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.51□□□□□ -1.69
CBX4O00257 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
CBX4O00257 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.51□□□□□ -1.69
CBX4O00257 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.51□□□□□ -1.69
CBX4O00257 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.51□□□□□ -1.69
CBX4O00257 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CBX4O00257 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CBX4O00257 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CBX4O00257 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 AC092326.2-201ENST00000624772 1561 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms