Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MTND1P20-201ENST00000430341 950 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 MTND5P25-201ENST00000430499 799 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 RPL35AP22-201ENST00000436855 335 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 RSU1P2-202ENST00000437884 485 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 VN1R34P-201ENST00000447387 883 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC188H7C350 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC188H7C350 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC188H7C350 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CCDC188H7C350 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC188H7C350 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CCDC188H7C350 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC188H7C350 OR7K1P-201ENST00000546439 926 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC188H7C350 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC188H7C350 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC188H7C350 AC106791.2-201ENST00000604680 391 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 MIR6076-201ENST00000617521 113 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC188H7C350 AC112204.3-201ENST00000623822 332 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC188H7C350 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC188H7C350 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC188H7C350 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC188H7C350 AC011460.1-201ENST00000636268 1834 ntBASIC3.34□□□□□ -1.87
CCDC188H7C350 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC188H7C350 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC188H7C350 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CCDC188H7C350 AC090740.1-201ENST00000623193 2262 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AL353743.1-202ENST00000431724 1695 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC188H7C350 OR4G2P-202ENST00000641004 1759 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 RNU6-433P-201ENST00000363216 104 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 RNU5E-8P-201ENST00000363502 116 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 RNU5F-7P-201ENST00000363696 115 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC188H7C350 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC188H7C350 RN7SKP159-201ENST00000410657 292 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 RN7SKP58-201ENST00000411010 305 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC005005.2-201ENST00000420779 380 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC188H7C350 AC011233.1-201ENST00000422812 283 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC188H7C350 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC188H7C350 AC234781.2-201ENST00000426370 994 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC188H7C350 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC188H7C350 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC188H7C350 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC188H7C350 AC092573.2-201ENST00000434546 243 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 NDUFB4P6-201ENST00000436819 366 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 MTCYBP39-201ENST00000437562 491 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC092641.1-201ENST00000440229 772 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC188H7C350 HMGN2P13-201ENST00000476476 274 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 RPL21P13-201ENST00000488305 481 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 HSPE1P23-201ENST00000509838 286 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC188H7C350 AC087276.1-201ENST00000529659 480 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 ZNF321P-202ENST00000550843 495 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC009094.1-201ENST00000564443 426 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC136618.2-201ENST00000575091 400 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 MIR544B-201ENST00000582372 78 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 TPMTP1-201ENST00000592307 737 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC091965.4-201ENST00000607691 587 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC188H7C350 AL603758.1-201ENST00000618654 241 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC017037.3-201ENST00000625016 472 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC188H7C350 AC019226.1-201ENST00000625666 515 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC007671.2-201ENST00000637344 619 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 AC021755.1-201ENST00000559747 1447 ntBASIC3.33□□□□□ -1.88
CCDC188H7C350 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC188H7C350 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC188H7C350 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC188H7C350 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC188H7C350 RNU6-660P-201ENST00000364566 109 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC188H7C350 RPL17P50-201ENST00000396131 546 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 NDUFB4P5-201ENST00000415445 361 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC188H7C350 BX842559.1-201ENST00000419615 532 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 SDCBPP3-201ENST00000419629 891 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 PPP1R11P2-201ENST00000423543 382 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC188H7C350 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC188H7C350 FAM103A2P-201ENST00000444122 354 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 MTCYBP3-201ENST00000445588 1137 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 AL358232.1-201ENST00000448030 501 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 ELOCP23-201ENST00000452014 332 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 AP1S2P1-201ENST00000457344 379 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC188H7C350 AC104619.4-201ENST00000510773 249 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC188H7C350 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC188H7C350 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC188H7C350 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC188H7C350 IGHV3-76-201ENST00000522465 295 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CCDC188H7C350 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms