Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 OR8L1P-201ENST00000534005 955 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL133271.1-201ENST00000538229 291 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC090502.2-201ENST00000549267 280 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 LARP7P2-201ENST00000575306 125 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC104984.5-201ENST00000586878 94 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 DUXAP4-201ENST00000603046 613 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC069304.2-201ENST00000605154 435 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL355493.4-201ENST00000618530 292 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC010338.1-201ENST00000621823 717 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC099786.3-201ENST00000565735 1410 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 MIR26A1-201ENST00000362205 77 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-600P-201ENST00000362524 99 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU1-35P-201ENST00000362782 153 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU5D-1-201ENST00000363299 116 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU4-28P-201ENST00000364739 141 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-730P-201ENST00000383954 104 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 MIR512-1-201ENST00000384913 84 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 MIR34A-201ENST00000385130 110 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RSL24D1P4-201ENST00000400938 484 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 MTND4LP20-201ENST00000402379 270 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU2-52P-201ENST00000410680 190 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU2-42P-201ENST00000410697 113 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 OFD1P18Y-201ENST00000420889 959 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 USP9YP11-201ENST00000427537 717 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 COX7BP2-201ENST00000437976 242 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL513043.1-201ENST00000439124 535 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC092393.1-201ENST00000439625 742 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL513328.1-201ENST00000446460 224 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 TRGVB-201ENST00000453257 471 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL590639.1-201ENST00000456484 337 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 MTCO3P2-201ENST00000457365 171 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 PNPLA4P1-201ENST00000458328 305 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC126389.1-201ENST00000477436 290 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC104090.1-201ENST00000506341 1171 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-311P-201ENST00000516224 102 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC005832.3-201ENST00000537929 631 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC004486.1-201ENST00000546846 233 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 MTND4P33-201ENST00000556706 766 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL132657.2-201ENST00000564417 358 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 MTATP6P24-201ENST00000576835 677 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 BNIP3P26-201ENST00000600827 554 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 VIS1.1-201ENST00000610517 203 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC079395.3-201ENST00000615161 484 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 Z99129.2-201ENST00000619967 314 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC006111.3-201ENST00000622137 383 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC009039.2-201ENST00000624524 529 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC120349.2-201ENST00000625002 298 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC068620.4-201ENST00000636730 1182 ntBASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.66□□□□□ -1.98
TMX2-CTNND1H3BSU7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.98
TMX2-CTNND1H3BSU7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 ELF2P3-201ENST00000445099 1506 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-216P-201ENST00000363282 104 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 SNORD113-6-201ENST00000363345 75 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-621P-201ENST00000364752 109 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 SNORA51.6-201ENST00000384151 125 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-83P-201ENST00000384568 112 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-636P-201ENST00000384598 107 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 MRPL50P2-201ENST00000416821 482 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 MRPS36P1-201ENST00000421291 307 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 MTCO3P1-205ENST00000422088 832 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 OOSP1P1-201ENST00000423265 274 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC005517.2-201ENST00000424673 553 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 DUTP6-201ENST00000425573 462 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC109583.1-201ENST00000432156 268 ntBASIC2.65□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC112653.1-201ENST00000443851 386 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms