Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RNU4-40P-201ENST00000364351 143 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AC119751.3-201ENST00000399720 670 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 FAT1P1-201ENST00000406588 507 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 RPS15AP38-201ENST00000413110 372 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 RPL23AP74-201ENST00000437246 471 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AC093156.1-201ENST00000440382 670 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 CYCSP32-201ENST00000440548 321 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 OR6K5P-201ENST00000447050 945 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AL162389.1-201ENST00000449233 177 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 BET1P1-201ENST00000482276 359 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 MTCYBP17-201ENST00000503579 789 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AC117522.2-201ENST00000510049 657 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 SNORA3.4-201ENST00000515969 96 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AC009812.2-201ENST00000517657 457 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 OR5G4P-201ENST00000525251 760 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AC011260.1-201ENST00000578420 472 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AL022161.1-201ENST00000604390 213 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AL160281.1-201ENST00000605307 311 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 YPEL5P2-201ENST00000605553 359 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AC018638.7-201ENST00000605836 1114 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AL356585.4-201ENST00000623078 1229 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 SNORA50A-202ENST00000629536 136 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 AL353743.1-202ENST00000431724 1695 ntBASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC010733.2-201ENST00000589496 5702 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 RNU6-1200P-201ENST00000384162 107 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 MIR181A2-201ENST00000384863 110 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 MIR506-201ENST00000384998 124 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 PSMA6P3-201ENST00000428242 164 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 RPL21P40-201ENST00000428586 483 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 RPS6P15-201ENST00000431996 751 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AL122001.1-201ENST00000457027 370 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 PNPLA4P1-201ENST00000458328 305 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 RNA5SP310-201ENST00000459084 116 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 RPL21P8-201ENST00000465083 535 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AP002884.2-201ENST00000471647 395 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 RPS3AP43-201ENST00000479743 781 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC079395.1-201ENST00000510981 262 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 RN7SKP272-201ENST00000516988 232 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 MED28P6-201ENST00000558776 231 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC055876.1-202ENST00000567053 138 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC135628.1-201ENST00000568867 534 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC106900.2-201ENST00000604994 317 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AP001521.1-201ENST00000609150 300 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC009570.1-201ENST00000609599 745 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AL020991.1-201ENST00000612314 373 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 MIR6076-201ENST00000617521 113 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AL353748.2-201ENST00000622148 471 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC079416.3-201ENST00000624479 549 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC007671.2-201ENST00000637344 619 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 AC103706.2-201ENST00000638080 240 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 MKKS-204ENST00000639674 192 ntBASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM49BA6NDI0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 Y_RNA.25-201ENST00000362528 102 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 SNORA48.8-201ENST00000391324 134 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 RPL23AP29-201ENST00000397284 453 ntBASIC3.22□□□□□ -1.89
TRIM49BA6NDI0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms