Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL445669.1-201ENST00000426743 755 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AL512661.1-201ENST00000434586 1253 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AL627224.1-201ENST00000448334 444 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC092436.1-201ENST00000506450 503 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC113155.1-201ENST00000511141 769 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC008494.2-201ENST00000514544 370 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 SNORA31.8-201ENST00000516327 108 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AP004607.1-201ENST00000524456 203 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 CBX3P4-201ENST00000538909 354 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 OR4G1P-201ENST00000588632 938 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC135178.6-201ENST00000605314 398 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC087241.4-201ENST00000612441 480 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC084768.2-201ENST00000622736 221 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC104454.1-201ENST00000421341 1401 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 SGO1P2-201ENST00000429458 1589 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU4-82P-201ENST00000362443 140 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 U8.3-201ENST00000363321 132 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU6-1243P-201ENST00000364028 107 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 SFR1P1-201ENST00000403720 688 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 RNA5SP56-201ENST00000410277 118 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 RPL35AP22-201ENST00000436855 335 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 TPTE2P6-202ENST00000445572 1007 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AC233279.1-201ENST00000455300 423 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 snoU13.22-201ENST00000459428 104 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 RPL30P9-201ENST00000465586 330 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AC069528.1-202ENST00000482888 637 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AC104685.1-201ENST00000502445 371 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 KLRA1P-201ENST00000503499 986 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 EEF1A1P37-201ENST00000522748 715 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 MIR4658-201ENST00000584344 65 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 FAM60CP-201ENST00000591086 664 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 XIAPP1-201ENST00000603162 600 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AL590808.1-201ENST00000618696 141 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 AL162373.1-201ENST00000620433 407 ntBASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV1-2A0A0B4J238 NSRP1P1-201ENST00000444067 1693 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC007342.9-201ENST00000623877 1385 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 MIR483-201ENST00000385070 76 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AL513475.1-201ENST00000406602 315 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 PTGES3P2-201ENST00000407942 482 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 OFD1P18Y-201ENST00000420889 959 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 HSFY1P1-201ENST00000423928 1178 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 PSPHP1-201ENST00000450062 261 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 EEF1B2P7-201ENST00000451177 676 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 USP9YP10-201ENST00000454868 628 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AL139109.1-201ENST00000455491 297 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 SNORD121B-201ENST00000458838 81 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 MTCO3P44-201ENST00000510977 541 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU6-250P-201ENST00000516958 103 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC126177.3-201ENST00000551839 688 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC090666.1-201ENST00000578241 445 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 BNIP3P33-201ENST00000598912 569 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AL009028.1-201ENST00000604895 802 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 BNIP3P7-201ENST00000605641 516 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 AC064859.1-201ENST00000624741 174 ntBASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
TRAV1-2A0A0B4J238 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms