Protein–RNA interactions for Protein: Q9Y5W8

SNX13, Sorting nexin-13, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13Q9Y5W8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 Y_RNA.367-201ENST00000365544 101 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 RNU6-701P-201ENST00000384059 107 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 MIR298-201ENST00000401212 88 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 RPS4XP8-201ENST00000402039 771 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 MIR1290-201ENST00000408735 78 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 RNU2-39P-201ENST00000410604 198 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AL353193.1-201ENST00000421444 268 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 NDUFB4P7-201ENST00000423198 363 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 DPPA2P1-201ENST00000428060 556 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC087650.1-201ENST00000431445 468 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AL627308.1-201ENST00000435693 821 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 PTMAP6-201ENST00000439110 327 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 DHFRP3-201ENST00000455595 559 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC022364.2-201ENST00000457963 554 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC010326.1-201ENST00000462726 602 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 ARL4AP2-201ENST00000507378 601 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 SNORD27.1-201ENST00000516319 72 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AP006587.4-201ENST00000526053 529 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 OR7E18P-201ENST00000592589 702 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 Z84480.1-201ENST00000605131 311 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 SDR42E1P1-201ENST00000611327 477 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 MIR486-1-201ENST00000612171 68 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC090132.2-201ENST00000615881 347 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC068831.8-201ENST00000620171 435 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 BDP1P-201ENST00000582658 1990 ntBASIC3.98□□□□□ -1.77
SNX13Q9Y5W8 AL672296.1-201ENST00000427780 2158 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 RNU6-1120P-201ENST00000362988 108 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 SNORD113.2-201ENST00000364166 89 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 SNORA70F-201ENST00000384142 135 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 Y_RNA.554-201ENST00000384672 102 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AL513331.1-201ENST00000411908 397 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 MTCO3P30-201ENST00000426425 670 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC093106.2-201ENST00000428212 385 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AL360081.1-201ENST00000428299 555 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 MTATP6P16-201ENST00000434543 526 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 RPL36AP6-201ENST00000435770 321 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 RPL23AP20-201ENST00000447965 421 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC013267.1-201ENST00000458227 267 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC126389.1-201ENST00000477436 290 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AP001086.1-201ENST00000494882 321 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 RPL31P61-201ENST00000496160 376 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC026427.2-201ENST00000506228 536 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC009646.1-201ENST00000510455 318 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC010342.1-201ENST00000514047 877 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 SNORA31.3-201ENST00000516029 96 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 RNA5SP143-201ENST00000516936 115 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 NARSP2-201ENST00000518524 679 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 HIGD1AP5-201ENST00000529959 259 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 HSPE1P5-201ENST00000561489 272 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AP005205.1-201ENST00000563503 508 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 RN7SL690P-201ENST00000582087 240 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC067852.3-201ENST00000589177 561 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 uc_338.32-201ENST00000615087 172 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 MIR7155-201ENST00000615925 56 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 RN7SL722P-201ENST00000617780 284 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 RN7SL565P-201ENST00000618246 284 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 AC005609.4-201ENST00000625071 447 ntBASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX13Q9Y5W8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms