Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 IGLVIV-65-201ENST00000517313 360 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 MTND1P35-201ENST00000526739 508 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC074050.1-201ENST00000563247 211 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 BDH2P1-201ENST00000602288 736 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AL445567.2-201ENST00000618935 498 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AL008636.1-201ENST00000625038 1018 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 FER-210ENST00000628534 558 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 BDP1P-201ENST00000582658 1990 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC02471-203ENST00000641941 4752 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 XIAPP3-201ENST00000312918 795 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 RNA5SP52-201ENST00000362448 134 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 Y_RNA.22-201ENST00000362492 102 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 RNA5SP388-201ENST00000362584 119 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 Y_RNA.89-201ENST00000363031 102 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 Y_RNA.295-201ENST00000364918 102 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 Y_RNA.367-201ENST00000365544 101 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 RNA5SP39-201ENST00000411245 120 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC011933.1-201ENST00000413334 321 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 SNRPFP1-201ENST00000414761 252 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 RAC1P3-201ENST00000416129 580 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC008850.1-201ENST00000427546 362 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 RPL7L1P10-201ENST00000427790 463 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AL353572.1-201ENST00000442490 417 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 ISCUP1-201ENST00000454451 448 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 RPL23AP31-201ENST00000456160 467 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC116533.1-201ENST00000459748 321 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC091167.1-201ENST00000492017 396 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC116353.2-201ENST00000505332 712 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC026427.2-201ENST00000506228 536 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 SNORA40.12-201ENST00000516329 111 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 Y_RNA.704-201ENST00000516851 102 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 SNORA31.22-201ENST00000517204 135 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 MIR2116-201ENST00000517221 80 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC118273.2-201ENST00000532092 465 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AP004242.1-201ENST00000533701 349 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 MTND6P33-201ENST00000571794 183 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 MIR3921-201ENST00000577308 85 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC008752.3-201ENST00000588113 712 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AL355810.1-201ENST00000614629 552 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC010133.1-201ENST00000615809 842 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 AC138649.5-201ENST00000637456 137 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 PNPT1P2-201ENST00000456768 2050 ntBASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA3Q9Y5H0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 SNORA31-201ENST00000362607 130 ntBASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 RNU6-179P-201ENST00000363350 107 ntBASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 MIR93-201ENST00000385024 80 ntBASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 RNU6-780P-201ENST00000391030 104 ntBASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 RNA5SP104-201ENST00000410989 118 ntBASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 RPL27AP8-201ENST00000424277 446 ntBASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 AL606489.2-201ENST00000433886 234 ntBASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 RPL23AP93-201ENST00000440847 484 ntBASIC4.31□□□□□ -1.72
PCDHGA3Q9Y5H0 RPL26P6-201ENST00000440913 438 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms