Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 HMGB3P20-201ENST00000417997 600 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 ZNF863P-201ENST00000426746 417 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 RPL7P2-201ENST00000427639 268 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 ISCA1P6-201ENST00000427740 390 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC002381.1-201ENST00000447049 280 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 HMGN2P21-201ENST00000447764 270 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 ARPC3P5-201ENST00000448802 534 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 RN7SL542P-201ENST00000467147 294 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AP000893.1-201ENST00000474462 794 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 RBM43P1-201ENST00000476891 1081 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC006390.1-201ENST00000508068 283 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC099522.1-202ENST00000514718 367 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 SUMO2P20-201ENST00000520803 283 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC104383.1-201ENST00000530297 370 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 CBX3P7-201ENST00000532876 502 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR4738-201ENST00000579134 87 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR4425-201ENST00000580572 84 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC090616.5-202ENST00000582111 297 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR5684-201ENST00000585074 65 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR4719-201ENST00000585233 84 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC008945.2-201ENST00000606056 604 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC008536.2-201ENST00000607284 349 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AL445264.1-201ENST00000621719 171 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR3653-201ENST00000625572 110 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC099654.10-201ENST00000640395 161 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGB1Q9Y5G3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 MIR383-201ENST00000362257 73 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 Y_RNA.46-201ENST00000362695 102 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 SNORA70.4-201ENST00000365509 134 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 RNU6-1103P-201ENST00000384150 107 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 MIR184-201ENST00000384962 84 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 RNU2-37P-201ENST00000410695 177 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 RNU2-41P-201ENST00000410991 178 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 RPL31P35-201ENST00000431058 377 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 MTCO2P11-201ENST00000431069 680 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 MTND3P23-201ENST00000431980 347 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 RPL17P49-201ENST00000443728 411 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC112653.1-201ENST00000443851 386 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 RPS17P13-201ENST00000448974 407 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 C1DP4-201ENST00000455429 424 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AL136097.1-201ENST00000456945 913 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC023598.1-201ENST00000472521 361 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC114967.1-201ENST00000504890 259 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 PCBP2P3-201ENST00000509726 843 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC008958.1-201ENST00000511047 682 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC008127.2-201ENST00000549925 1075 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 TVP23BP1-201ENST00000557500 617 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 ZNF192P1-203ENST00000565888 810 ntBASIC3.58□□□□□ -1.84
PCDHGB1Q9Y5G3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms